RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ZNF562Q6V9R5 426 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 MOB1BQ7L9L4 216 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 KCNG3Q8TAE7 436 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 PTX4Q96A99 478 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 CITED4Q96RK1 184 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 C11orf54Q9H0W9 315 aaPredicted RBP10.06□□□□□ -0.8
MRPL55-228ENST00000476267 LPAR5Q9H1C0 372 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 SLA2Q9H6Q3 261 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 C8orf4Q9NR00 106 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 C19orf73Q9NVV2 129 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 OR1A1Q9P1Q5 309 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 LSM2Q9Y333 95 aaKnown RBP10.06□□□□□ -0.8
MRPL55-228ENST00000476267 A3GALT2U3KPV4 340 aa10.06□□□□□ -0.8
MRPL55-228ENST00000476267 ARPC1BO15143 372 aaKnown RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 SPDEFO95238 335 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 CA2P00918 260 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 IGKV1-16P04430 117 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 HLA-DRB3P79483 266 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 PITPNAQ00169 270 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 TMEM267Q0VDI3 215 aaPredicted RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 PLECQ15149 4684 aaKnown RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 GLT8D1Q68CQ7 371 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 HAPLN4Q86UW8 402 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 C8orf59Q8N0T1 100 aaPredicted RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 FAM89BQ8N5H3 189 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 MS4A15Q8N5U1 240 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 ZNF383Q8NA42 475 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 LFNGQ8NES3 379 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 GFI1Q99684 422 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 HDHD3Q9BSH5 251 aaPredicted RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
MRPL55-228ENST00000476267 AK3Q9UIJ7 227 aa10.05□□□□□ -0.8
MRPL55-228ENST00000476267 IGKV1-6A0A0C4DH72 117 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 LCE6AA0A183 80 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 SOCS1O15524 211 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 BPNT1O95861 308 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 TFAP2AP05549 437 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 UCHL1P09936 223 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 IGHV4-30-4P0DP06 118 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 TMEM50BP56557 158 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 LINC00205P59089 165 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 TPPP2P59282 170 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 PLGLAQ15195 96 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 RBM48Q5RL73 367 aaKnown RBP10.04□□□□□ -0.8
MRPL55-228ENST00000476267 DRAXINQ8NBI3 349 aaPredicted RBP10.04□□□□□ -0.8
MRPL55-228ENST00000476267 OR6M1Q8NGM8 313 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 MS4A10Q96PG2 267 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 CLCC1Q96S66 551 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
MRPL55-228ENST00000476267 RIMS4Q9H426 269 aaPredicted RBP10.04□□□□□ -0.8
MRPL55-228ENST00000476267 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 GAR1Q9NY12 217 aaKnown RBP10.04□□□□□ -0.8
MRPL55-228ENST00000476267 RNF150Q9ULK6 438 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 HSF4Q9ULV5 492 aa10.04□□□□□ -0.8
MRPL55-228ENST00000476267 SORL1Q92673 2214 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 H7C2Y5 167 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 HSPA12AO43301 675 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 BRI3O95415 125 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 CDK1P06493 297 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 GSTP1P09211 210 aaKnown RBP10.03□□□□□ -0.8
MRPL55-228ENST00000476267 SCTP09683 121 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 LYL1P12980 280 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 SRMP19623 302 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 ZBTB25P24278 435 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 CEACAM6P40199 344 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 SRSF7Q16629 238 aaKnown RBP eCLIP10.03□□□□□ -0.8
MRPL55-228ENST00000476267 IL34Q6ZMJ4 242 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 BPIFB6Q8NFQ5 453 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 ABHD5Q8WTS1 349 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 OR4C12Q96R67 309 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 TMED9Q9BVK6 235 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
MRPL55-228ENST00000476267 Q9N2K0 584 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 PLEKHJ1Q9NW61 149 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 STUB1Q9UNE7 303 aa10.03□□□□□ -0.8
MRPL55-228ENST00000476267 H3BUA1 57 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 LDLRAD4O15165 306 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 TRGV3P03979 118 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 CRYGBP07316 175 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 KLF5Q13887 457 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-228ENST00000476267 MRGPRG-AS1Q2M3A8 158 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 HSD17B12Q53GQ0 312 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 OGFRL1Q5TC84 451 aaPredicted RBP10.02□□□□□ -0.81
MRPL55-228ENST00000476267 PDPNQ86YL7 162 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 POC5Q8NA72 575 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 SETD6Q8TBK2 473 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 TSNAXQ99598 290 aaKnown RBP10.02□□□□□ -0.81
MRPL55-228ENST00000476267 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 MGAT4AQ9UM21 535 aa10.02□□□□□ -0.81
MRPL55-228ENST00000476267 SLC17A2O00624 439 aa10.01□□□□□ -0.81
MRPL55-228ENST00000476267 CASQ2O14958 399 aaPredicted RBP10.01□□□□□ -0.81
MRPL55-228ENST00000476267 CPEP16870 476 aa10.01□□□□□ -0.81
MRPL55-228ENST00000476267 IRF3Q14653 427 aa10.01□□□□□ -0.81
MRPL55-228ENST00000476267 FXYD3Q14802 87 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms