RNA–Protein interactions for RNA: ENST00000475969.5

DFFB-208, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,731 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-208ENST00000475969 BTBD17A6NE02 478 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 C17orf98A8MV24 154 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 MLNRO43193 412 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 CEACAM1P13688 526 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 SP5Q6BEB4 398 aaPredicted RBP13.36□□□□□ -0.27
DFFB-208ENST00000475969 VWA1Q6PCB0 445 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 NECAP1Q8NC96 275 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 GTF3AQ92664 365 aaKnown RBP13.36□□□□□ -0.27
DFFB-208ENST00000475969 POM121Q96HA1 1249 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 UNKLQ9H9P5 680 aaKnown RBP13.36□□□□□ -0.27
DFFB-208ENST00000475969 LIN7CQ9NUP9 197 aaKnown RBP13.36□□□□□ -0.27
DFFB-208ENST00000475969 DOK5Q9P104 306 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 A0A1B0GV90 55 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 OR5H1A6NKK0 313 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 ERVK11-1P61568 191 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 SLC38A11Q08AI6 406 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 EDDM3AQ14507 147 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 C21orf62-AS1Q17RA5 79 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 C9orf152Q5JTZ5 239 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 ARFGEF3Q5TH69 2177 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 PKDREJQ9NTG1 2253 aa13.36□□□□□ -0.27
DFFB-208ENST00000475969 IFITM10A6NMD0 228 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 BCL2P10415 239 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 MDH2P40926 338 aaKnown RBP13.35□□□□□ -0.27
DFFB-208ENST00000475969 GLIPR1P48060 266 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 KDF1Q8NAX2 398 aaPredicted RBP13.35□□□□□ -0.27
DFFB-208ENST00000475969 TCTEX1D2Q8WW35 142 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 FER1L6-AS2Q96M78 137 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 POLDIP2Q9Y2S7 368 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 MAP1LC3B2A6NCE7 125 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 ZG16O60844 167 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 HBZP02008 142 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 HBE1P02100 147 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 EIF2S3P41091 472 aaKnown RBP13.35□□□□□ -0.27
DFFB-208ENST00000475969 RELQ04864 619 aaPredicted RBP13.35□□□□□ -0.27
DFFB-208ENST00000475969 KHDC3LQ587J8 217 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 MAP1LC3BQ9GZQ8 125 aa13.35□□□□□ -0.27
DFFB-208ENST00000475969 SEBOXQ9HB31 216 aaPredicted RBP13.35□□□□□ -0.27
DFFB-208ENST00000475969 POLEQ07864 2286 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 PTBP3O95758 552 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 SSX9Q7RTT3 188 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 RPUSD4Q96CM3 377 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 AKAP13Q12802 2813 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 HCFC1P51610 2035 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 TPRP12270 2363 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 PPIHO43447 177 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 LY86O95711 162 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 COL8A2P25067 703 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 HBG1P69891 147 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 HBG2P69892 147 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 FOXF2Q12947 444 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 WDR25Q64LD2 544 aaPredicted RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 OR5T1Q8NG75 326 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 LHX4Q969G2 390 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 GALMQ96C23 342 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
DFFB-208ENST00000475969 KCNIP1Q9NZI2 227 aa13.34□□□□□ -0.27
DFFB-208ENST00000475969 ODAMA1E959 279 aa13.33□□□□□ -0.27
DFFB-208ENST00000475969 BRWD1-AS2P59051 145 aa13.33□□□□□ -0.27
DFFB-208ENST00000475969 TNFRSF9Q07011 255 aa13.33□□□□□ -0.27
DFFB-208ENST00000475969 MRPL49Q13405 166 aaKnown RBP13.33□□□□□ -0.27
DFFB-208ENST00000475969 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.27
DFFB-208ENST00000475969 ACSM6Q6P461 480 aa13.33□□□□□ -0.27
DFFB-208ENST00000475969 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.27
DFFB-208ENST00000475969 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BKO60814 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BJP06899 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BOP23527 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BBP33778 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BDP58876 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BCP62807 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 TFF3Q07654 80 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 ZNF146Q15072 292 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 ADIRFQ15847 76 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST2H2BEQ16778 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.33□□□□□ -0.28
DFFB-208ENST00000475969 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BHQ93079 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 COQ2Q96H96 371 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BNQ99877 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 HIST1H2BMQ99879 126 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 SMDT1Q9H4I9 107 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 MBNL3Q9NUK0 354 aaKnown RBP13.33□□□□□ -0.28
DFFB-208ENST00000475969 TNCP24821 2201 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 TIMM8AO60220 97 aaPredicted RBP13.33□□□□□ -0.28
DFFB-208ENST00000475969 OR8G5Q8NG78 346 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 OR13A1Q8NGR1 328 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 PSG11Q9UQ72 335 aa13.33□□□□□ -0.28
DFFB-208ENST00000475969 LINC00473A8K010 186 aa13.32□□□□□ -0.28
DFFB-208ENST00000475969 ZNF883P0CG24 379 aa13.32□□□□□ -0.28
DFFB-208ENST00000475969 RAC2P15153 192 aa13.32□□□□□ -0.28
DFFB-208ENST00000475969 TUBG1P23258 451 aa13.32□□□□□ -0.28
DFFB-208ENST00000475969 TGFBR3Q03167 851 aa13.32□□□□□ -0.28
DFFB-208ENST00000475969 C11orf53Q8IXP5 236 aa13.32□□□□□ -0.28
DFFB-208ENST00000475969 ZNF610Q8N9Z0 462 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms