RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NPSP0C0P6 89 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 ID1P41134 155 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 CAPZBP47756 277 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 NPBWR2P48146 333 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 UCP2P55851 309 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 KLF3P57682 345 aaPredicted RBP10.05□□□□□ -0.8
U2AF1-209ENST00000475639 JOSD1Q15040 202 aaPredicted RBP10.05□□□□□ -0.8
U2AF1-209ENST00000475639 PMCHL1Q16048 86 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 TMEM215Q68D42 235 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 FAM222BQ8WU58 562 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 PARD6GQ9BYG4 376 aaPredicted RBP10.05□□□□□ -0.8
U2AF1-209ENST00000475639 UBTD1Q9HAC8 227 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
U2AF1-209ENST00000475639 CDAP32320 146 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
U2AF1-209ENST00000475639 MORN1Q5T089 497 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 LDLRAD1Q5T700 205 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 C10orf126Q8N4M7 172 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 MRGPRDQ8TDS7 321 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 PATE1Q8WXA2 126 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 MPC1Q9Y5U8 109 aa10.05□□□□□ -0.8
U2AF1-209ENST00000475639 A0A1B0GV72 72 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 GEMIN2O14893 280 aaKnown RBP10.04□□□□□ -0.8
U2AF1-209ENST00000475639 P2RY1P47900 373 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF137PP52743 207 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 DLK1P80370 383 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 WDR38Q5JTN6 314 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 SSX8Q7RTT4 187 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 RNF133Q8WVZ7 376 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 OR4C45A6NMZ5 311 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 C4orf51C9J302 202 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 FHITP49789 147 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 FAM166AQ6J272 317 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 CALHM1Q8IU99 346 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 PRNDQ9UKY0 176 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 DOCK3Q8IZD9 2030 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 TGIF2-C20orf24A0A0A6YYL0 155 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 PAGE4O60829 102 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 TRGC1P0CF51 173 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 GABRG2P18507 467 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 HYAL1Q12794 435 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 WIPI1Q5MNZ9 446 aaPredicted RBP10.04□□□□□ -0.8
U2AF1-209ENST00000475639 ASPHD2Q6ICH7 369 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 PARM1Q6UWI2 310 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 SGMS2Q8NHU3 365 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 OIT3Q8WWZ8 545 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 DDB2Q92466 427 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 GMPPAQ96IJ6 420 aaPredicted RBP10.04□□□□□ -0.8
U2AF1-209ENST00000475639 RAXQ9Y2V3 346 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.04□□□□□ -0.8
U2AF1-209ENST00000475639 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 CHST1O43916 411 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 SSPNQ14714 243 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 CCL26Q9Y258 94 aa10.04□□□□□ -0.8
U2AF1-209ENST00000475639 DLEU1O43261 78 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF32P17041 273 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 LINC01590Q5TEZ4 76 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF107Q9UII5 783 aaPredicted RBP10.03□□□□□ -0.8
U2AF1-209ENST00000475639 CDS2O95674 445 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 DYNLT3P51808 116 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 CACNG7P62955 275 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 SPINK9Q5DT21 86 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 C10orf113Q5VZT2 155 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 PRELID3AQ96N28 172 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 SAP30LQ9HAJ7 183 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 MMP25Q9NPA2 562 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 IL19Q9UHD0 177 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 TSPAN13O95857 204 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
U2AF1-209ENST00000475639 PLAURQ03405 335 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 RNFT1Q5M7Z0 435 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 OR4B1Q8NGF8 309 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 MRGPRX3Q96LB0 322 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 INSIG2Q9Y5U4 225 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 CCR5P51681 352 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 ISXQ2M1V0 245 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
U2AF1-209ENST00000475639 A0A1W2PRD5 423 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 A0A1W2PRF3 423 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 A0A1W2PRM7 423 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 WIPF3A6NGB9 483 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 SRSF10O75494 262 aaKnown RBP10.02□□□□□ -0.8
U2AF1-209ENST00000475639 MT-CO3P00414 261 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 SPEM2Q0P670 501 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 ZNF576Q9H609 170 aa10.02□□□□□ -0.8
U2AF1-209ENST00000475639 WNK2Q9Y3S1 2297 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 HEATR5AQ86XA9 2040 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 H0Y8X5 98 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 H3BQ15 152 aa10.02□□□□□ -0.81
U2AF1-209ENST00000475639 GBGT1Q8N5D6 347 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms