RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 KRR1Q13601 381 aaKnown RBP3.06□□□□□ -1.92
SDHB-205ENST00000475506 GNA13Q14344 377 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 KCNJ8Q15842 424 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 TMEM136Q6ZRR5 245 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 ANKARQ7Z5J8 1434 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 DOLPP1Q86YN1 238 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 KCTD4Q8WVF5 259 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 TNFAIP8L1Q8WVP5 186 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 SCRT1Q9BWW7 348 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 CDCA4Q9BXL8 241 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 NSD3Q9BZ95 1437 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 FAM206AQ9NX38 181 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 CDK12Q9NYV4 1490 aaPredicted RBP3.06□□□□□ -1.92
SDHB-205ENST00000475506 USE1Q9NZ43 259 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 ZNF492Q9P255 531 aa3.06□□□□□ -1.92
SDHB-205ENST00000475506 MARCOQ9UEW3 520 aaPredicted RBP3.06□□□□□ -1.92
SDHB-205ENST00000475506 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.06□□□□□ -1.92
SDHB-205ENST00000475506 MYOM1P52179 1685 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 ZC3H13Q5T200 1668 aaKnown RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 USP32Q8NFA0 1604 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 A2MP01023 1474 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 A0A1W2PP64 1363 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 ARHGEF10O15013 1369 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 IGKV1-12A0A0C4DH73 117 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 OR5H14A6NHG9 310 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 ZNF729A6NN14 1252 aaPredicted RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 MIF4GDA9UHW6 222 aaKnown RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 PGRMC1O00264 195 aaKnown RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 ZW10O43264 779 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 DENRO43583 198 aaKnown RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 OR5F1O95221 314 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 IGKV1D-12P01611 117 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 IFNA16P05015 189 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 HMGN1P05114 100 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 RPS17P08708 135 aaKnown RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 CTSEP14091 401 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 CD99P14209 185 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 CELP19835 753 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 AGTR1P30556 359 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 SERPINB1P30740 379 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 VBP1P61758 197 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 EIF4EBP2Q13542 120 aaPredicted RBP3.05□□□□□ -1.92
SDHB-205ENST00000475506 ZNF846Q147U1 533 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 MMDQ15546 238 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 CLVS2Q5SYC1 327 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 EBLN2Q6P2I7 272 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 AKAP14Q86UN6 197 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 STX12Q86Y82 276 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 KRTCAP2Q8N6L1 136 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 NATD1Q8N6N6 113 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 ZNF565Q8N9K5 539 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 OR8J2Q8NGG1 315 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 DEDD2Q8WXF8 326 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 S100ZQ8WXG8 99 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 YIPF5Q969M3 257 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 MROQ9BYG7 248 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 GABARAPL1Q9H0R8 117 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 OR2D2Q9H210 308 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 TAS2R1Q9NYW7 299 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 OR51B4Q9Y5P0 310 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 ICOSQ9Y6W8 199 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 MYH7BA7E2Y1 1941 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 MYH8P13535 1937 aa3.05□□□□□ -1.92
SDHB-205ENST00000475506 ABCC6O95255 1503 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 SYCP2Q9BX26 1530 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ATP10BO94823 1461 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 M0QZ92 97 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ACOX3O15254 700 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 IFNA14P01570 189 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 HLA-DRAP01903 254 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 SHBGP04278 402 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 TYMSP04818 313 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 PFN1P07737 140 aaKnown RBP3.04□□□□□ -1.92
SDHB-205ENST00000475506 C8orf88P0DMB2 117 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 HAAOP46952 286 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 AP2S1P53680 142 aaPredicted RBP3.04□□□□□ -1.92
SDHB-205ENST00000475506 TRMT12Q53H54 448 aaKnown RBP3.04□□□□□ -1.92
SDHB-205ENST00000475506 PDZD11Q5EBL8 140 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ACSBG2Q5FVE4 666 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 Q6ZRU5 148 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ARPINQ7Z6K5 226 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 H1FOOQ8IZA3 346 aaPredicted RBP3.04□□□□□ -1.92
SDHB-205ENST00000475506 TMEM75Q8N9X5 138 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 HAVCR2Q8TDQ0 301 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 FAM172AQ8WUF8 416 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ASB13Q8WXK3 278 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 APOBEC3DQ96AK3 386 aaPredicted RBP3.04□□□□□ -1.92
SDHB-205ENST00000475506 SPANXB1Q9NS25 103 aaPredicted RBP3.04□□□□□ -1.92
SDHB-205ENST00000475506 TMEM216Q9P0N5 145 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 STOML2Q9UJZ1 356 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ERGIC3Q9Y282 383 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 SHANK1Q9Y566 2161 aa3.04□□□□□ -1.92
SDHB-205ENST00000475506 ADGRB3O60242 1522 aa3.03□□□□□ -1.92
SDHB-205ENST00000475506 DUOX2Q9NRD8 1548 aa3.03□□□□□ -1.92
SDHB-205ENST00000475506 RFX7Q2KHR2 1363 aa3.03□□□□□ -1.92
SDHB-205ENST00000475506 MYO5BQ9ULV0 1848 aa3.03□□□□□ -1.92
SDHB-205ENST00000475506 SEC16AO15027 2179 aa3.03□□□□□ -1.92
SDHB-205ENST00000475506 KNDC1Q76NI1 1749 aa3.03□□□□□ -1.92
SDHB-205ENST00000475506 LRRIQ1Q96JM4 1722 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms