RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
GGA1-218ENST00000475445 ERRFI1Q9UJM3 462 aaPredicted RBP12.16□□□□□ -0.46
GGA1-218ENST00000475445 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.15□□□□□ -0.46
GGA1-218ENST00000475445 SELEP16581 610 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 TNFSF10P50591 281 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 ZNF497Q6ZNH5 498 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 SCCPDHQ8NBX0 429 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 OR2G3Q8NGZ4 309 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 EIF5A2Q9GZV4 153 aaKnown RBP12.15□□□□□ -0.46
GGA1-218ENST00000475445 TAAR3PQ9P1P4 343 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 TNFSF12O43508 249 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 C1QL1O75973 258 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 SERPINE2P07093 398 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 PGA5P0DJD9 388 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 KLF3P57682 345 aaPredicted RBP12.15□□□□□ -0.46
GGA1-218ENST00000475445 DEFB124Q8NES8 71 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 OR5C1Q8NGR4 320 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 TMEM171Q8WVE6 324 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
GGA1-218ENST00000475445 IQCF6A8MYZ5 107 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 SLC33A1O00400 549 aaPredicted RBP12.14□□□□□ -0.47
GGA1-218ENST00000475445 OR2H2O95918 312 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 IGHG3P01860 377 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 IRF2P14316 349 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 IGHV1-2P23083 117 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 BRS3P32247 399 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 ASCL1P50553 236 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 SELENOTP62341 195 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 ZNF146Q15072 292 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 INO80CQ6PI98 192 aaPredicted RBP12.14□□□□□ -0.47
GGA1-218ENST00000475445 ODF3L1Q8IXM7 274 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
GGA1-218ENST00000475445 OR2J1Q9GZK6 312 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 MMP24Q9Y5R2 645 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 C20orf202A1L168 122 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 CHST1O43916 411 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 TMEM50AO95807 157 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 CELA3BP08861 270 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 CEACAM1P13688 526 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 OMGP23515 440 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 DYNLT3P51808 116 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 OR5I1Q13606 314 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
GGA1-218ENST00000475445 PITPNC1Q9UKF7 332 aa12.14□□□□□ -0.47
GGA1-218ENST00000475445 SIRPB1O00241 398 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 GFRA3O60609 400 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
GGA1-218ENST00000475445 IL6RP08887 468 aaPredicted RBP12.13□□□□□ -0.47
GGA1-218ENST00000475445 SPINK2P20155 84 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 IL1F10Q8WWZ1 152 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 GPR146Q96CH1 333 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 SLC35B3Q9H1N7 401 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 MBNL3Q9NUK0 354 aaKnown RBP12.13□□□□□ -0.47
GGA1-218ENST00000475445 OR1A1Q9P1Q5 309 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 CBY3A6NI87 242 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 SH2D1BO14796 132 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 OPN1MWP04001 364 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 OPN1MW2P0DN77 364 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 OPN1MW3P0DN78 364 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 PSG2P11465 335 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 PAX9P55771 341 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 RPL23AP62750 156 aaKnown RBP12.13□□□□□ -0.47
GGA1-218ENST00000475445 TESK1Q15569 626 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 TMPRSS7Q7RTY8 843 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 PIP4P1Q86T03 277 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 OR51H1Q8NH63 302 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 ATP5SQ99766 215 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 MSL2Q9HCI7 577 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 TRAPPC2LQ9UL33 140 aa12.13□□□□□ -0.47
GGA1-218ENST00000475445 A0A1W2PR80 420 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
GGA1-218ENST00000475445 PPP1CCP36873 323 aaKnown RBP12.12□□□□□ -0.47
GGA1-218ENST00000475445 ZNF154Q13106 437 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 C1orf194Q5T5A4 169 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 Q6ZT83 130 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 FAM214BQ7L5A3 538 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 NUDT11Q96G61 164 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 LIN7CQ9NUP9 197 aaKnown RBP12.12□□□□□ -0.47
GGA1-218ENST00000475445 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 A0A0G2JRQ6 117 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 CST7O76096 145 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 TRGC2P03986 189 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 DLK1P80370 383 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 PMP22Q01453 160 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 GUSBP1Q15486 140 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 DPPA3Q6W0C5 159 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 VASH2Q86V25 355 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 CSTL1Q9H114 145 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 HIPK2Q9H2X6 1198 aa12.12□□□□□ -0.47
GGA1-218ENST00000475445 KCNJ16Q9NPI9 418 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms