RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 GCH1P30793 250 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 ATP5G3P48201 142 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 SERF2P84101 59 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 TGFBR3Q03167 851 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 Q6ZS49 121 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 RNASEH2CQ8TDP1 164 aaKnown RBP11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 PYGO2Q9BRQ0 406 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 ICE1Q9Y2F5 2266 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 GJE1A6NN92 205 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 TGOLN2O43493 480 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 ZG16O60844 167 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 IL3RAP26951 378 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 SPINK14Q6IE38 97 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 MCEMP1Q8IX19 187 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 ZNF391Q9UJN7 358 aa11.58□□□□□ -0.56
SEMA4D-217ENST00000475255 ZDBF2Q9HCK1 2354 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 RNPS1Q15287 305 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 TBX15Q96SF7 602 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 IMMP2LQ96T52 175 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 HES7Q9BYE0 225 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 PRDM14Q9GZV8 571 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 OR6C3Q9NZP0 311 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 POLR3KQ9Y2Y1 108 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 PAM16Q9Y3D7 125 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 MBP02144 154 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 RPL30P62888 115 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 RAB30Q15771 203 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 Q8NFD4 153 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 TMEM68Q96MH6 324 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 MS4A10Q96PG2 267 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 HIPK2Q9H2X6 1198 aa11.57□□□□□ -0.56
SEMA4D-217ENST00000475255 LOC400499M0QZD8 3231 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 M0R143 59 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 SRD5A2P31213 254 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 THBS3P49746 956 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 Q0VFX4 171 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 IQCJQ1A5X6 159 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 DNLZQ5SXM8 178 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 DBX2Q6ZNG2 339 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 SH2D2AQ9NP31 389 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 NCOR1O75376 2440 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 C11orf94C9JXX5 98 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 SPINK4O60575 86 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 NDUFB4O95168 129 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 CNN1P51911 297 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 COLCA1Q6ZS62 124 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 PINX1Q96BK5 328 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 TRIOBPQ9H2D6 2365 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 LOC102723996A0A087X1L8 192 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 TOX3O15405 576 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 GCGP01275 180 aa11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 EPHA8P29322 1005 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 RBM14Q96PK6 669 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-217ENST00000475255 GPR179Q6PRD1 2367 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM166BA8MTA8 275 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 NPSP0C0P6 89 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FRMD6-AS1P0C7T7 363 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 TFPI2P48307 235 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 EDDM3BP56851 147 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 CXorf67Q86X51 503 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 OR5A2Q8NGI9 324 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 C12orf49Q9H741 205 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 CTXND1A0A1B0GTU2 59 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A18PA6NE21 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A16PA6NEW6 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A20PA6NIJ5 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A22PA8MWA6 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A12PA8MX19 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A5PA8MXJ8 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 S1PR2O95136 353 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A15PP0C7V4 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A13PP0C7W8 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A14PP0C7W9 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 FAM90A24PP0C7X0 464 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 LTC4SQ16873 150 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 PPIAL4AQ9Y536 164 aa11.55□□□□□ -0.56
SEMA4D-217ENST00000475255 IGHV3-43A0A0B4J1X8 118 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 OR2H2O95918 312 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 IGHV3-43DP0DP04 118 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 HOXA6P31267 233 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 GBGT1Q8N5D6 347 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 OR52L2PQ8NGH6 319 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 LSM10Q969L4 123 aaKnown RBP11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 NEIL1Q96FI4 390 aaPredicted RBP11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 TECTBQ96PL2 329 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 OR2D2Q9H210 308 aa11.54□□□□□ -0.56
SEMA4D-217ENST00000475255 MED13Q9UHV7 2174 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms