RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 CDK10Q15131 360 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 CT45A1Q5HYN5 189 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 UTF1Q5T230 341 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 TPTE2P1Q5T6R2 138 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 FAM53AQ6NSI3 398 aaPredicted RBP9.49□□□□□ -0.89
CLIP2-204ENST00000474962 OR52I2Q8NH67 350 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 CT45A3Q8NHU0 189 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 S1PR3Q99500 378 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 C11orf54Q9H0W9 315 aaPredicted RBP9.49□□□□□ -0.89
CLIP2-204ENST00000474962 RANBP3Q9H6Z4 567 aaPredicted RBP9.49□□□□□ -0.89
CLIP2-204ENST00000474962 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 SERTAD4Q9NUC0 356 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 PIPOXQ9P0Z9 390 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 TCF19Q9Y242 345 aa9.49□□□□□ -0.89
CLIP2-204ENST00000474962 TET2Q6N021 2002 aaPredicted RBP9.48□□□□□ -0.89
CLIP2-204ENST00000474962 IGKV1-6A0A0C4DH72 117 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 ZNF736B4DX44 427 aaPredicted RBP9.48□□□□□ -0.89
CLIP2-204ENST00000474962 G3V4G9 280 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 J3QRK9 145 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 ITGB1BP1O14713 200 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 HSD17B6O14756 317 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 RAB29O14966 203 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 CTDSPLO15194 276 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 SLC31A2O15432 143 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 TXNL1O43396 289 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 PMP2P02689 132 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 IFNA6P05013 189 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 OR8U9P0C7N5 309 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 OR5H8P0DN80 308 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 CD28P10747 220 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 GPR12P47775 334 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 LUMP51884 338 aaPredicted RBP9.48□□□□□ -0.89
CLIP2-204ENST00000474962 DGCR2P98153 550 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 SSBP1Q04837 148 aaKnown RBP9.48□□□□□ -0.89
CLIP2-204ENST00000474962 ACTBL2Q562R1 376 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 LIAT1Q6ZQX7 453 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 MOB3BQ86TA1 216 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 TGIF2LXQ8IUE1 241 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 ZNF439Q8NDP4 499 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 OR8U1Q8NH10 309 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 TAS2R8Q9NYW2 309 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 EHFQ9NZC4 300 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 KLK11Q9UBX7 282 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 MTFP1Q9UDX5 166 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 RNF150Q9ULK6 438 aa9.48□□□□□ -0.89
CLIP2-204ENST00000474962 OPN1MWP04001 364 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 OPN1MW2P0DN77 364 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 OPN1MW3P0DN78 364 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 NAT1P18440 290 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 NFYAP23511 347 aaPredicted RBP9.47□□□□□ -0.89
CLIP2-204ENST00000474962 CD24P25063 80 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 FCGR2CP31995 323 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 INPP1P49441 399 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 NSUN5P1Q3KNT7 163 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 CCDC190Q86UF4 302 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 TMEM17Q86X19 198 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 H1FOOQ8IZA3 346 aaPredicted RBP9.47□□□□□ -0.89
CLIP2-204ENST00000474962 OR8H3Q8N146 312 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 Q8N2B8 174 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 Q8N402 240 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 OR6F1Q8NGZ6 308 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 SMIM4Q8WVI0 70 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 ABHD14BQ96IU4 210 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 PTTG2Q9NZH5 202 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 PITPNC1Q9UKF7 332 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 OR2W1Q9Y3N9 320 aa9.47□□□□□ -0.89
CLIP2-204ENST00000474962 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
CLIP2-204ENST00000474962 LY6LH3BQJ8 138 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 GSTZ1O43708 216 aaPredicted RBP9.46□□□□□ -0.9
CLIP2-204ENST00000474962 SLC22A5O76082 557 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 HRH1P35367 487 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 ETV6P41212 452 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 REG1BP48304 166 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 RFX2P48378 723 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 DYNLT3P51808 116 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 TAS2R19P59542 299 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 HERV-K104P61576 105 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 RNASE10Q5GAN6 216 aaKnown RBP9.46□□□□□ -0.9
CLIP2-204ENST00000474962 LYSMD2Q8IV50 215 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 CAPSLQ8WWF8 208 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 THAP7Q9BT49 309 aaPredicted RBP9.46□□□□□ -0.9
CLIP2-204ENST00000474962 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 TOLLIPQ9H0E2 274 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 OR2D2Q9H210 308 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 ANAPC10Q9UM13 185 aa9.46□□□□□ -0.9
CLIP2-204ENST00000474962 SAA2-SAA4A0A096LPE2 208 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 IGHV1-3A0A0C4DH29 117 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 LANCL1O43813 399 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 RAB3DO95716 219 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 PRB2P02812 416 aaPredicted RBP9.45□□□□□ -0.9
CLIP2-204ENST00000474962 FAM106CPP0CH98 169 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 SAA2P0DJI9 122 aaPredicted RBP9.45□□□□□ -0.9
CLIP2-204ENST00000474962 TBPP20226 339 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 FXYD4P59646 89 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 AP3S2P59780 193 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 ZNF45Q02386 682 aa9.45□□□□□ -0.9
CLIP2-204ENST00000474962 ZNF816Q0VGE8 651 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms