RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MRPL20Q9BYC9 149 aaKnown RBP5.59□□□□□ -1.51
LIMD1-204ENST00000474665 TINAGL1Q9GZM7 467 aaPredicted RBP5.59□□□□□ -1.51
LIMD1-204ENST00000474665 SRRQ9GZT4 340 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 AKIP1Q9NQ31 210 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 BATF3Q9NR55 127 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 TNFRSF19Q9NS68 423 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR2W1Q9Y3N9 320 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 FAM181BA6NEQ2 426 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 J3QRK9 145 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 M0QYG6 137 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 GPR137BO60478 399 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 RGS11O94810 467 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 CD3DP04234 171 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF735P0CB33 412 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 RCVRNP35243 200 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 CEACAM3P40198 252 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 BRWD1-AS2P59051 145 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 SCGB2A2Q13296 93 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 LSAMPQ13449 338 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 DYRK1AQ13627 763 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 EBI3Q14213 229 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 CDK10Q15131 360 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 LY6EQ16553 131 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 VAX1Q5SQQ9 334 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 FAM131AQ6UXB0 335 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 GLDNQ6ZMI3 551 aaPredicted RBP5.58□□□□□ -1.52
LIMD1-204ENST00000474665 Q6ZS46 218 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 TMEM219Q86XT9 240 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 TMEM86BQ8N661 226 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 Q8N6K4 173 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF383Q8NA42 475 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 DRAXINQ8NBI3 349 aaPredicted RBP5.58□□□□□ -1.52
LIMD1-204ENST00000474665 GIMAP1Q8WWP7 306 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 FCAMRQ8WWV6 532 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 TOMM40LQ969M1 308 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 MRGPRFQ96AM1 343 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 RPEQ96AT9 228 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 GPHA2Q96T91 129 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 NABP2Q9BQ15 211 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 GINS4Q9BRT9 223 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 IFT46Q9NQC8 304 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 PLSCR3Q9NRY6 295 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 SDHAF2Q9NX18 166 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 VPREB3Q9UKI3 123 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 GAB2Q9UQC2 676 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 TCF19Q9Y242 345 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 AMMECR1Q9Y4X0 333 aaPredicted RBP5.58□□□□□ -1.52
LIMD1-204ENST00000474665 POMT1Q9Y6A1 747 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
LIMD1-204ENST00000474665 TET2Q6N021 2002 aaPredicted RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 OR5H14A6NHG9 310 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 LINC00473A8K010 186 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 H0YJW9 148 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RAB29O14966 203 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RBBP9O75884 186 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 PPYP01298 95 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 GAPDHP04406 335 aaKnown RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 SNRNP70P08621 437 aaKnown RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 PTBP1P26599 531 aaKnown RBP eCLIP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 S100A5P33763 92 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RAB7AP51149 207 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 TAS2R46P59540 309 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 ARPC4P59998 168 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RPL30P62888 115 aaKnown RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 MRPS10P82664 201 aaKnown RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 SSBP1Q04837 148 aaKnown RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 KLF9Q13886 244 aaPredicted RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 HNF4GQ14541 408 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 BAK1Q16611 211 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 AADACL3Q5VUY0 350 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 FAAP20Q6NZ36 180 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 C16orf87Q6PH81 154 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RBMS3Q6XE24 437 aaKnown RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 MOB3BQ86TA1 216 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 LHFPL1Q86WI0 220 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 THNSL2Q86YJ6 484 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 TGIF2LXQ8IUE1 241 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 OR8H3Q8N146 312 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 TMEM229BQ8NBD8 167 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 OR5AN1Q8NGI8 311 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 OR5H2Q8NGV7 314 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 OR5R1Q8NH85 324 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 C15orf40Q8WUR7 153 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 EDARADDQ8WWZ3 215 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 DDB2Q92466 427 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 THAP7Q9BT49 309 aaPredicted RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 FXYD6Q9H0Q3 95 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 OR2D2Q9H210 308 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 DPAGT1Q9H3H5 408 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 CCL28Q9NRJ3 127 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 NECAP2Q9NVZ3 263 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 EHFQ9NZC4 300 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 PTTG2Q9NZH5 202 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RABL2AQ9UBK7 228 aaPredicted RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF107Q9UII5 783 aaPredicted RBP5.57□□□□□ -1.52
LIMD1-204ENST00000474665 RABL2BQ9UNT1 228 aa5.57□□□□□ -1.52
LIMD1-204ENST00000474665 ANKRD20A5PA0PJZ0 165 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 TRIM77I1YAP6 450 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 M0R1X1 148 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms