RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	RWDD2B	P57060	319 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	RPS24	P62847	133 aa	Known RBP	2.04	□□□□□ -2.08
BBX-223	ENST00000473542	HPCA	P84074	193 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	TMEM176B	Q3YBM2	270 aa	Predicted RBP	2.04	□□□□□ -2.08
BBX-223	ENST00000473542	RASL11A	Q6T310	242 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	ATP5L2	Q7Z4Y8	100 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542		Q8WTZ3	238 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	MBOAT7	Q96N66	472 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	STAC	Q99469	402 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	MGLL	Q99685	303 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	TIPIN	Q9BVW5	301 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	DRC3	Q9H069	523 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	USE1	Q9NZ43	259 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	EMC3	Q9P0I2	261 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	CCL26	Q9Y258	94 aa		2.04	□□□□□ -2.08
BBX-223	ENST00000473542	NOSIP	Q9Y314	301 aa	Known RBP	2.04	□□□□□ -2.08
BBX-223	ENST00000473542	ZNF407	Q9C0G0	2248 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	DHX57	Q6P158	1386 aa	Known RBP	2.03	□□□□□ -2.08
BBX-223	ENST00000473542	MAP3K5	Q99683	1374 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	C17orf51	A8MQB3	221 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	SLC17A3	O00476	420 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	MRAS	O14807	208 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	APOE	P02649	317 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	BLVRB	P30043	206 aa	Predicted RBP	2.03	□□□□□ -2.08
BBX-223	ENST00000473542	DDT	P30046	118 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	BTN3A2	P78410	334 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	FAM229B	Q4G0N7	80 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	2.03	□□□□□ -2.08
BBX-223	ENST00000473542	TMEM156	Q8N614	296 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	OR5C1	Q8NGR4	320 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	NSRP1	Q9H0G5	558 aa	Known RBP	2.03	□□□□□ -2.08
BBX-223	ENST00000473542	C16orf95	Q9H693	158 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	HES4	Q9HCC6	221 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	SNX12	Q9UMY4	172 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	HDGFL3	Q9Y3E1	203 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	ZNF337	Q9Y3M9	751 aa		2.03	□□□□□ -2.08
BBX-223	ENST00000473542	LTBP2	Q14767	1821 aa		2.03	□□□□□ -2.09
BBX-223	ENST00000473542	THSD7A	Q9UPZ6	1657 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	ABCC11	Q96J66	1382 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	C5orf49	A4QMS7	147 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	UBFD1	O14562	309 aa	Known RBP	2.02	□□□□□ -2.09
BBX-223	ENST00000473542	GSTZ1	O43708	216 aa	Predicted RBP	2.02	□□□□□ -2.09
BBX-223	ENST00000473542	MT-CO2	P00403	227 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	IL6	P05231	212 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	ZNF7	P17097	686 aa	Predicted RBP	2.02	□□□□□ -2.09
BBX-223	ENST00000473542	GABRA4	P48169	554 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	CXCR4	P61073	352 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	ZNF181	Q2M3W8	571 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	CCDC121	Q6ZUS5	278 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	IQCF2	Q8IXL9	164 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	ZNF567	Q8N184	647 aa		2.02	□□□□□ -2.09
BBX-223	ENST00000473542	LCT	P09848	1927 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	KMT2E	Q8IZD2	1858 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542		H3BPC8	53 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	SLC16A4	O15374	487 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	NDUFB2	O95178	105 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	COX5B	P10606	129 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	CXCL2	P19875	107 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	CXCL3	P19876	107 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	CRHBP	P24387	322 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	CDC34	P49427	236 aa	Predicted RBP	2.01	□□□□□ -2.09
BBX-223	ENST00000473542	HOXC5	Q00444	222 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	2.01	□□□□□ -2.09
BBX-223	ENST00000473542	JOSD2	Q8TAC2	188 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	C16orf78	Q8WTQ4	265 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	2.01	□□□□□ -2.09
BBX-223	ENST00000473542	DERL2	Q9GZP9	239 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542	KLK5	Q9Y337	293 aa	Predicted RBP	2.01	□□□□□ -2.09
BBX-223	ENST00000473542	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	2.01	□□□□□ -2.09
BBX-223	ENST00000473542	SLIT2	O94813	1529 aa		2.01	□□□□□ -2.09
BBX-223	ENST00000473542		A0A0J9YX75	114 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	C19orf71	A6NCJ1	209 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	TMEM235	A6NFC5	223 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	KNCN	A6PVL3	124 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	LY6L	H3BQJ8	138 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	DEXI	O95424	95 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	SOD1	P00441	154 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	GZMB	P10144	247 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	CCL3	P10147	92 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	CSRP1	P21291	193 aa	Known RBP	2	□□□□□ -2.09
BBX-223	ENST00000473542	MAGOH	P61326	146 aa	Known RBP	2	□□□□□ -2.09
BBX-223	ENST00000473542	HLA-DRB3	P79483	266 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	MLLT11	Q13015	90 aa	Predicted RBP	2	□□□□□ -2.09
BBX-223	ENST00000473542	GNA13	Q14344	377 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	CST9	Q5W186	159 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	AMTN	Q6UX39	209 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	POLR1D	Q9Y2S0	133 aa		2	□□□□□ -2.09
BBX-223	ENST00000473542	IGHV3-15	A0A0B4J1V0	119 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	TRGV4	A0A0C4DH28	118 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542		M0R381	172 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	PFDN6	O15212	129 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	KRT75	O95678	551 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	HLA-DRA	P01903	254 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	CRYBB3	P26998	211 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	CD200	P41217	278 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	FOXF1	Q12946	379 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	UAP1	Q16222	522 aa	Predicted RBP	1.99	□□□□□ -2.09
BBX-223	ENST00000473542	PLPPR5	Q32ZL2	321 aa		1.99	□□□□□ -2.09
BBX-223	ENST00000473542	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	1.99	□□□□□ -2.09
BBX-223	ENST00000473542	OGFRL1	Q5TC84	451 aa	Predicted RBP	1.99	□□□□□ -2.09

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms