RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 AADACL4Q5VUY2 407 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 PLCXD3Q63HM9 321 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF322Q6U7Q0 402 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-205ENST00000473344 TMEM91Q6ZNR0 172 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 CALHM1Q8IU99 346 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 OR2AK2Q8NG84 335 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 OR5A2Q8NGI9 324 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 OR4Q3Q8NH05 313 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 AQP3Q92482 292 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 AKR1E2Q96JD6 320 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 AMELYQ99218 206 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 SLC25A21Q9BQT8 299 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-205ENST00000473344 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 NMNAT2Q9BZQ4 307 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 WNT10AQ9GZT5 417 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 OR51V1Q9H2C8 321 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 OR51I2Q9H344 312 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 SMDT1Q9H4I9 107 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 ZCCHC4Q9H5U6 513 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 CMC2Q9NRP2 79 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 GAR1Q9NY12 217 aaKnown RBP5.57□□□□□ -1.52
CKS1B-205ENST00000473344 GHRLQ9UBU3 117 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 OR14J1Q9UGF5 321 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF107Q9UII5 783 aaPredicted RBP5.57□□□□□ -1.52
CKS1B-205ENST00000473344 POLDIP2Q9Y2S7 368 aa5.57□□□□□ -1.52
CKS1B-205ENST00000473344 RNF222A6NCQ9 220 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 TAAR5O14804 337 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 TCAPO15273 167 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 TXNL1O43396 289 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 SYNGR1O43759 233 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 RBBP9O75884 186 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 SIX6O95475 246 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 TK1P04183 234 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 RPLP1P05386 114 aaKnown RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 LIMS3P0CW19 117 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 LIMS4P0CW20 117 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 CDX1P47902 265 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 CEBPDP49716 269 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 CCR6P51684 374 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 EDDM3BP56851 147 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 DLK1P80370 383 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 NHLH2Q02577 135 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 TMEM95Q3KNT9 176 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 DMRTC1Q5HYR2 192 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF684Q5T5D7 378 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 LINC01590Q5TEZ4 76 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 OR10K2Q6IF99 312 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 FDX2Q6P4F2 183 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 ACP7Q6ZNF0 438 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF573Q86YE8 665 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 DYNAPQ8N1N2 210 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 C11orf42Q8N5U0 333 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 CD177Q8N6Q3 437 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 POC1AQ8NBT0 407 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 OR4X2Q8NGF9 303 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 OR8B12Q8NGG6 310 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 OTOSQ8NHW6 89 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 WIPF2Q8TF74 440 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 PCNPQ8WW12 178 aaKnown RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 LYZL4Q96KX0 146 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF488Q96MN9 340 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 ABHD1Q96SE0 405 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF471Q9BX82 626 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 GPR61Q9BZJ8 451 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 FGF23Q9GZV9 251 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 MED20Q9H944 212 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 UQCC1Q9NVA1 299 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 LAMP5Q9UJQ1 280 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 HILPDAQ9Y5L2 63 aa5.56□□□□□ -1.52
CKS1B-205ENST00000473344 TSSC4Q9Y5U2 329 aaPredicted RBP5.56□□□□□ -1.52
CKS1B-205ENST00000473344 A0A0U1RQV5 110 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 TMEM269A0A1B0GVZ9 245 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 WI2-2373I1.2A0A1W2PRP0 233 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 COLCA2A8K830 154 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 C17orf98A8MV24 154 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 J3QT63 122 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 GPR31O00270 319 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 GOSR2O14653 212 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 NRASP01111 189 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 MBP02144 154 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 RBP4P02753 201 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 MT-ND4P03905 459 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 CD3GP09693 182 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 LINC00614P0C842 121 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 PET100P0DJ07 73 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 PGA5P0DJD9 388 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 ZNF728P0DKX0 622 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 IGHV1-8P0DP01 117 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 HIST1H1BP16401 226 aaKnown RBP5.55□□□□□ -1.52
CKS1B-205ENST00000473344 HTR2CP28335 458 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 HOXD3P31249 432 aaPredicted RBP5.55□□□□□ -1.52
CKS1B-205ENST00000473344 MAS1LP35410 378 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 DYNLT3P51808 116 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 ACTBP60709 375 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 ACTA2P62736 377 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 ACTG2P63267 376 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 EFNB1P98172 346 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 HAGHQ16775 308 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 FAM74A1Q5RGS3 127 aa5.55□□□□□ -1.52
CKS1B-205ENST00000473344 PLBD1Q6P4A8 553 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms