RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 OR5AN1Q8NGI8 311 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 GHSRQ92847 366 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 Q96M66 194 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 SULT4A1Q9BR01 284 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 SELENOIQ9C0D9 397 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 PLEKHA3Q9HB20 300 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 PAK1IP1Q9NWT1 392 aaPredicted RBP7.04□□□□□ -1.28
VCL-204ENST00000472585 CLEC2DQ9UHP7 191 aa7.04□□□□□ -1.28
VCL-204ENST00000472585 KLK5Q9Y337 293 aaPredicted RBP7.04□□□□□ -1.28
VCL-204ENST00000472585 TRBV5-7A0A0A0MS05 114 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 WBP4O75554 376 aaKnown RBP7.03□□□□□ -1.28
VCL-204ENST00000472585 DEDDO75618 318 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 CD7P09564 240 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 MGMTP16455 207 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 EDN2P20800 178 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 CD40LGP29965 261 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 PPP3R1P63098 170 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.28
VCL-204ENST00000472585 CCDC58Q4VC31 144 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 PYHIN1Q6K0P9 492 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 TRAT1Q6PIZ9 186 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 ZNF554Q86TJ5 538 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 DEFB125Q8N687 156 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 ZFP41Q8N8Y5 198 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 ZNF383Q8NA42 475 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 DRAXINQ8NBI3 349 aaPredicted RBP7.03□□□□□ -1.28
VCL-204ENST00000472585 ABHD5Q8WTS1 349 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 PYDC1Q8WXC3 89 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 PGLYRP3Q96LB9 341 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 S100A13Q99584 98 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 SLC29A1Q99808 456 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 FAAP24Q9BTP7 215 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 SLA2Q9H6Q3 261 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 SPACA1Q9HBV2 294 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 FGF20Q9NP95 211 aaPredicted RBP7.03□□□□□ -1.28
VCL-204ENST00000472585 FAM53CQ9NYF3 392 aa7.03□□□□□ -1.28
VCL-204ENST00000472585 METTL1Q9UBP6 276 aaKnown RBP7.03□□□□□ -1.28
VCL-204ENST00000472585 PDCD6O75340 191 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 CA11O75493 328 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 CRTAPO75718 401 aaPredicted RBP7.02□□□□□ -1.29
VCL-204ENST00000472585 TPPPO94811 219 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 IGLV2-23P01705 113 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 TFAP2AP05549 437 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 GLAP06280 429 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 CD2P06729 351 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 CRYGBP07316 175 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 FCGR1AP12314 374 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 GPR176Q14439 515 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 FXYD3Q14802 87 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 PLGLAQ15195 96 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 C1orf146Q5VVC0 180 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 OR10K2Q6IF99 312 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 ZNF343Q6P1L6 599 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 ZNF880Q6PDB4 577 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 CBR4Q8N4T8 237 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 JAGN1Q8N5M9 183 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 POC5Q8NA72 575 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 OR2AK2Q8NG84 335 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 FAM46BQ96A09 425 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 GALMQ96C23 342 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 MRPL48Q96GC5 212 aaKnown RBP7.02□□□□□ -1.29
VCL-204ENST00000472585 C11orf54Q9H0W9 315 aaPredicted RBP7.02□□□□□ -1.29
VCL-204ENST00000472585 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 BABAM2Q9NXR7 383 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 KCNIP1Q9NZI2 227 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 SLC23A1Q9UHI7 598 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 RNF150Q9ULK6 438 aa7.02□□□□□ -1.29
VCL-204ENST00000472585 A0A0A6YYD4 124 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 SCO2A0A1W2PP80 73 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 OR5H14A6NHG9 310 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 FAM90A7PA6NKC0 464 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
VCL-204ENST00000472585 FAM90A23PA8MXZ1 464 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 RAB29O14966 203 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 NAPSAO96009 420 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 GSTP1P09211 210 aaKnown RBP7.01□□□□□ -1.29
VCL-204ENST00000472585 ZP3P21754 424 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 HTR2CP28335 458 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 CD81P60033 236 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 CD300EQ496F6 205 aaPredicted RBP7.01□□□□□ -1.29
VCL-204ENST00000472585 Q499Y3 187 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 AWAT2Q6E213 333 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 CEMP1Q6PRD7 247 aaPredicted RBP7.01□□□□□ -1.29
VCL-204ENST00000472585 C6orf201Q7Z4U5 140 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 Q8N402 240 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 GRPEL2Q8TAA5 225 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 IL1F10Q8WWZ1 152 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 SMIM19Q96E16 107 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 KCNK15Q9H427 330 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 ZNF355PQ9NSJ1 428 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 PIPOXQ9P0Z9 390 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 OR1A1Q9P1Q5 309 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 PEF1Q9UBV8 284 aaKnown RBP7.01□□□□□ -1.29
VCL-204ENST00000472585 WASHC3Q9Y3C0 194 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 DMRT1Q9Y5R6 373 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 SELENOKQ9Y6D0 94 aa7.01□□□□□ -1.29
VCL-204ENST00000472585 IGKV1-6A0A0C4DH72 117 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms