RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MED12LQ86YW9 2145 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ODF3L1Q8IXM7 274 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 Q8N976 141 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZIC4Q8N9L1 334 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 C5orf17Q8NAS9 161 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF114Q8NC26 417 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 OR5P3Q8WZ94 311 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 KCNS1Q96KK3 526 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 VSTM2LQ96N03 204 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PILRBQ9UKJ0 227 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CTXND1A0A1B0GTU2 59 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 A0A1W2PS18 150 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CD300LBA8K4G0 201 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PPIAL4DF5H284 164 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 G3V4G9 280 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 WISP1O95388 367 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 IGKV1D-33P01593 117 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 IGKV1-33P01594 117 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 APOBEC3AP31941 199 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 CDAP32320 146 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ATP5G3P48201 142 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CRYBA4P53673 196 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TCL1AP56279 114 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CLDN15P56746 228 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CKS1BP61024 79 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ID3Q02535 119 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ARL16Q0P5N6 197 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF324BQ6AW86 544 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 CNKSR3Q6P9H4 555 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 IGF2-ASQ6U949 168 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 C12orf54Q6X4T0 127 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 GAPTQ8N292 157 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 OR4F17Q8NGA8 305 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 LMX1AQ8TE12 382 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 LIPHQ8WWY8 451 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TAF15Q92804 592 aaKnown RBP eCLIP3.61□□□□□ -1.83
VPS50-210ENST00000471188 GMPPAQ96IJ6 420 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 OR2A5Q96R48 311 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ATP6V0BQ99437 205 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 MBNL1Q9NR56 388 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 THYN1Q9P016 225 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CLCF1Q9UBD9 225 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF407Q9C0G0 2248 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SERTM2A0A1B0GWG4 89 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 C7orf71A4D174 169 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SLC22A20A6NK97 555 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 ALG1L2C9J202 215 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 NPIPA3F8WFD2 350 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 M0R2Z0 102 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 RER1O15258 196 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 OR7C1O76099 320 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 UTS2O95399 124 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 CLDN1O95832 211 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 IL11P20809 199 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 USF1P22415 310 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 PAX9P55771 341 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SELENOVP59797 346 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 DPTQ07507 201 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 HLA-BQ31612 363 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 DOK3Q7L591 496 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 WDR5BQ86VZ2 330 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 ZNF525Q8N782 197 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 OR2M7Q8NG81 312 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 APOBEC3DQ96AK3 386 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 ZNF48Q96MX3 618 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 RAB40CQ96S21 281 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SIGMAR1Q99720 223 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 PSMG3Q9BT73 122 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 APOOQ9BUR5 198 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 C11orf1Q9H5F2 150 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 LYRM4Q9HD34 91 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SLC7A10Q9NS82 523 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 CRIM1Q9NZV1 1036 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 KIAA1549LQ6ZVL6 1849 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 A0A087X0K7 114 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 TMED7-TICAM2A0A0A6YYA0 188 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 HSPB6O14558 160 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SNAI2O43623 268 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SYNGR2O43760 224 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 COX5AP20674 150 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 NPPCP23582 126 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 GATA2P23769 480 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 NPBWR2P48146 333 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 DAP3P51398 398 aaKnown RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 FOXL2P58012 376 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 GNB1P62873 340 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 SLC38A11Q08AI6 406 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 Q0VG73 95 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 LRRC75BQ2VPJ9 315 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 PIGYQ3MUY2 71 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 ACSF3Q4G176 576 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 MRPL54Q6P161 138 aaKnown RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 ACSM6Q6P461 480 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 RNASEKQ6P5S7 137 aaKnown RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 SLC25A34Q6PIV7 304 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 PRSS57Q6UWY2 283 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 C19orf35Q6ZS72 473 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 ZDHHC23Q8IYP9 409 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 CA13Q8N1Q1 262 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms