RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SFTPCP11686 197 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 TSPAN7P41732 249 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 NUTF2P61970 127 aaKnown RBP6□□□□□ -1.45
BRCA1-210ENST00000471181 LCN2P80188 198 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 ZNF415Q09FC8 603 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 TMEM42Q69YG0 159 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 SLC25A2Q9BXI2 301 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 MS4A5Q9H3V2 200 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 BTAF1O14981 1849 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 ARFGEF2Q9Y6D5 1785 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 IGHV3OR16-13A0A075B7E8 117 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 IGHV3-74A0A0B4J1X5 117 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 MUC21A0A0G2JKD1 596 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 MUC21A0A140T8X8 626 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 C2CD4DB7Z1M9 353 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 TMEM50AO95807 157 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 CYB5R3P00387 301 aaPredicted RBP6□□□□□ -1.45
BRCA1-210ENST00000471181 BGLAPP02818 100 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 LINC00614P0C842 121 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 CD69Q07108 199 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 MUC21Q5SSG8 566 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 SH2D5Q6ZV89 423 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 ASB10Q8WXI3 467 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 TMEM45BQ96B21 275 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 NRIP2Q9BQI9 281 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 TLNRD1Q9H1K6 362 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 BCL2L10Q9HD36 194 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 PRRT4C9JH25 899 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 F8WEM9 126 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 H7C1H1 209 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 PLPP3O14495 311 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 HLA-DQA1P01909 254 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 GZMBP10144 247 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 BCL2P10415 239 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 ATP6V0CP27449 155 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 FAM53BQ14153 422 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 FOXB2Q5VYV0 432 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 FLRT3Q9NZU0 649 aa6□□□□□ -1.45
BRCA1-210ENST00000471181 MT-ND6P03923 174 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 ISG15P05161 165 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 SRFP11831 508 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 RNASE4P34096 147 aaKnown RBP5.99□□□□□ -1.45
BRCA1-210ENST00000471181 RIPPLY3P57055 190 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 MEF2BQ02080 365 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-210ENST00000471181 GAGE2EQ4V326 116 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 TPRX1Q8N7U7 411 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 EEF1AKMT3Q96AZ1 226 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 ZNF488Q96MN9 340 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 GAGE2DQ9UEU5 116 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 ELF5Q9UKW6 265 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-210ENST00000471181 AFDNP55196 1824 aaKnown RBP5.99□□□□□ -1.45
BRCA1-210ENST00000471181 A0A0A6YYD5 115 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 A0A0B4J2E0 115 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 A0A0U1RQV5 110 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 A0A1B0GX12 115 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 TCRBV5S2A0A599 114 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 GRIFINA4D1Z8 144 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 TMEM229AB2RXF0 380 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 RPS11P62280 158 aaKnown RBP eCLIP5.99□□□□□ -1.45
BRCA1-210ENST00000471181 CLDN10P78369 228 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 RUNX1Q01196 453 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 NPVFQ9HCQ7 196 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 DLEC1Q9Y238 1755 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 IGHV3-35A0A0C4DH35 117 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 ZFPL1O95159 310 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 NTN1O95631 604 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 HPRT1P00492 218 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 KLKB1P03952 638 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 KLK2P20151 261 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 ASIPP42127 132 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 CTAG1AP78358 180 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 CCL8P80075 99 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 OR4D11Q8NGI4 311 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 LOXHD1Q8IVV2 1947 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 IGHV3-49A0A0A0MS15 119 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 GGTLC3B5MD39 225 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 C16orf97H3BN30 126 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 LINC01565O15544 149 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 ETHE1O95571 254 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 P2RY4P51582 365 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 CYSLTR1Q9Y271 337 aa5.99□□□□□ -1.45
BRCA1-210ENST00000471181 HMSDA8MTL9 139 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 RPL36A-HNRNPH2H7BZ11 118 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 KLF4O43474 513 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 SRD5A2P31213 254 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 NPC2P61916 151 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 PRSS53Q2L4Q9 553 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 TMEM155Q4W5P6 130 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 MESTQ5EB52 335 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 MIC13Q5XKP0 118 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 GOLT1AQ6ZVE7 132 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 TCF23Q7RTU1 214 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 GATD1Q8NB37 220 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 CNRIP1Q96F85 164 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-210ENST00000471181 KCNS1Q96KK3 526 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 VCX2Q9H322 139 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 ZNF430Q9H8G1 570 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-210ENST00000471181 DSPPQ9NZW4 1301 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 IGKV6D-21A0A0A0MT36 114 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms