RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TBL1XO60907 577 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 SS18L1O75177 396 aaPredicted RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 LYPLA1O75608 230 aaPredicted RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 POP7O75817 140 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 SUPT7LO94864 414 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 IGF2P01344 180 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 IGHG2P01859 326 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 IFNA4P05014 189 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 S100A8P05109 93 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 DBIP07108 87 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 CECR9P0C854 216 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 KRTAP10-1P60331 282 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 IFITM3Q01628 133 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 TMEM267Q0VDI3 215 aaPredicted RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ARFRP1Q13795 201 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 C16orf72Q14CZ0 275 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 RBMY1FQ15415 496 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 LTC4SQ16873 150 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF404Q494X3 552 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 RNASE10Q5GAN6 216 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 OR2B11Q5JQS5 317 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 PLET1Q6UQ28 207 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF493Q6ZR52 646 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 Q6ZRU5 148 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 CLEC20AQ6ZU45 233 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ATP5L2Q7Z4Y8 100 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 SLC25A45Q8N413 288 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 LINC00337Q8N6G1 96 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 TMEM252Q8N6L7 170 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF283Q8N7M2 679 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 GPR119Q8TDV5 335 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 OR5P3Q8WZ94 311 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 KLK6Q92876 244 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 C14orf144Q96I85 54 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 OR7D2Q96RA2 312 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 LYSMD1Q96S90 227 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF382Q96SR6 550 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF184Q99676 751 aaPredicted RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 DOHHQ9BU89 302 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 POLR2J2Q9GZM3 115 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 EIF5A2Q9GZV4 153 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 POLR2J3Q9H1A7 115 aaKnown RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 MARCH5Q9NX47 278 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 MED11Q9P086 117 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 TMEM216Q9P0N5 145 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 DPM3Q9P2X0 92 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 CHD4Q14839 1912 aa3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 RAI1Q7Z5J4 1906 aaPredicted RBP3.27□□□□□ -1.89
PRPF40A-206ENST00000471167 RTL1A6NKG5 1358 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 DNMT1P26358 1616 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 CHD2O14647 1828 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 IGSF9BQ9UPX0 1349 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 LRRK1Q38SD2 2015 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 C2orf16Q68DN1 1984 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TRAV36DV7A0A075B6V5 113 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 A0A096LPI6 279 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 IGHV2-26A0A0B4J1V2 119 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 IGKV1-8A0A0C4DH67 115 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 A0A0G2JN53 185 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 PVALEFA0A1B0GWK0 134 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 A0A1B0GX51 115 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 SIGLEC16A6NMB1 481 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 K7ERU9 68 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 AIPO00170 330 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 BANF1O75531 89 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TNFSF15O95150 251 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 CDS2O95674 445 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 HLA-DRB1P01911 266 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 FABP3P05413 133 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 CSN2P05814 226 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 LGALS1P09382 135 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TSPAN19P0C672 248 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 IGHV3-43DP0DP04 118 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 PGAM2P15259 253 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 ORM2P19652 201 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 CCL1P22362 96 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 HSPA9P38646 679 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 RBP2P50120 134 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 SYNJ2BPP57105 145 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 RPS20P60866 119 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 UBE2NP61088 152 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 ADIGQ0VDE8 80 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 KIAA0040Q15053 153 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 RHEBQ15382 184 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 NEDD8Q15843 81 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 FBXL19-AS1Q494R0 122 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 NXNL2Q5VZ03 156 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 FBXW12Q6X9E4 464 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 ACP7Q6ZNF0 438 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 DAZ4Q86SG3 579 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF589Q86UQ0 364 aaPredicted RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TMEM61Q8N0U2 210 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TSTD1Q8NFU3 115 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 VN1R17PQ8TDU5 208 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 THEM6Q8WUY1 208 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 DCAKDQ8WVC6 231 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 PTX4Q96A99 478 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 GPR146Q96CH1 333 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms