RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 GINS4Q9BRT9 223 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 CHIAQ9BZP6 476 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 PARP12Q9H0J9 701 aaKnown RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 OR51J1Q9H342 316 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 RIMS4Q9H426 269 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ANXA10Q9UJ72 324 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 NUBP2Q9Y5Y2 271 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 LINC00312Q9Y6C7 94 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 MAP1AP78559 2803 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-208ENST00000470268 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 ZFHX3Q15911 3703 aa3.86□□□□□ -1.79
SF3B1-208ENST00000470268 LOC105371242A0A075B767 164 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV3-43A0A0B4J1X8 118 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 PPIAL4CA0A0B4J2A2 164 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 KIR2DS1A0A191URI9 304 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 KBTBD11-OT1A0A1B0GTJ5 212 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 hADV38S2A0JD32 116 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 C7orf66A4D0T2 115 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TRDCB7Z8K6 153 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 G3V3Q6 166 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 H7C1Q1 480 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 FABP7O15540 132 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ANKRD17O75179 2603 aaKnown RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV3-7P01780 117 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 CD74P04233 296 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 RLN1P04808 185 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF728P0DKX0 622 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 PPIAL4GP0DN37 164 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV3-43DP0DP04 118 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 GZMHP20718 246 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 HRH1P35367 487 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 CBX5P45973 191 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ARF6P62330 175 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 BLOC1S1P78537 153 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 HLA-DRB3P79483 266 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MRPS15P82914 257 aaKnown RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 GNMTQ14749 295 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 SRSF7Q16629 238 aaKnown RBP eCLIP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 LTC4SQ16873 150 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TMEM249Q2WGJ8 235 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MAJINQ3KP22 176 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 PRAMEF5Q5TYX0 476 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MALRD1Q5VYJ5 2156 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 LIN54Q6MZP7 749 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 STEAP1BQ6NZ63 245 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TMED4Q7Z7H5 227 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 LDLRAD3Q86YD5 345 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 FAM219AQ8IW50 185 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 OR5AP2Q8NGF4 316 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 OR13C8Q8NGS7 320 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IL1F10Q8WWZ1 152 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 LEAP2Q969E1 77 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ARL11Q969Q4 196 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MSI2Q96DH6 328 aaKnown RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF714Q96N38 554 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 LINC00574Q9H8X3 128 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IFT46Q9NQC8 304 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 CALYQ9NYX4 217 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 OR6C3Q9NZP0 311 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 OR1A1Q9P1Q5 309 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNRD1Q9P1U0 126 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 FLNBO75369 2602 aaKnown RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TRGV10A0A0A0MS01 117 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TRBV6-7A0A0A0MS04 114 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV2-70DA0A0C4DH43 119 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF729A6NN14 1252 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 C17orf98A8MV24 154 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF736B4DX44 427 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 SSNA1O43805 119 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 FOXH1O75593 365 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 NDUFB6O95139 128 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 RAB3DO95716 219 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ECDO95905 644 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 HEXAP06865 529 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MSMBP08118 114 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 AKAIN1P0CW23 69 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MMP9P14780 707 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TMEM11P17152 192 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 NFYAP23511 347 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 KIR2DS4P43632 304 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TIRAPP58753 221 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ACTBP60709 375 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ACTG1P63261 375 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 SSBP1Q04837 148 aaKnown RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 KIR2DS1Q14954 304 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 DCAF12L2Q5VW00 463 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF660Q6AZW8 331 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 LAMTOR1Q6IAA8 161 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 HEPN1Q6WQI6 88 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 IDO2Q6ZQW0 420 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MOB1BQ7L9L4 216 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 NOXA1Q86UR1 476 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 SLC51BQ86UW2 128 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TMEM229BQ8NBD8 167 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 UXS1Q8NBZ7 420 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 OR52L2PQ8NGH6 319 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TNFRSF14Q92956 283 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 CABLES2Q9BTV7 478 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms