RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 NPIPB7O75200 414 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 NDUFB6O95139 128 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 CD1AP06126 327 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 GPX1P07203 203 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 AADACP22760 399 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 PPIBP23284 216 aaKnown RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 CDAP32320 146 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 LEPP41159 167 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 LPAR6P43657 344 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 PGFP49763 221 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 P2RX1P51575 399 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 MTCP1P56278 107 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 EWSR1Q01844 656 aaKnown RBP eCLIP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 LAMTOR4Q0VGL1 99 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 PNRC1Q12796 327 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 GUSBP1Q15486 140 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 ADIRFQ15847 76 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 CCL15Q16663 113 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 C19orf54Q5BKX5 351 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 SFRP4Q6FHJ7 346 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 FBXL22Q6P050 247 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 RASL11AQ6T310 242 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 Q6ZWC4 215 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 OR10D3Q8NH80 312 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 OR1L1Q8NH94 360 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 DDB2Q92466 427 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM125Q96AQ2 219 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 STARD4Q96DR4 205 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 TBL1YQ9BQ87 522 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 SLC25A39Q9BZJ4 359 aaPredicted RBP4.3□□□□□ -1.72
COL3A1-205ENST00000470167 RHOJQ9H4E5 214 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 RERGLQ9H628 205 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 NMRAL1Q9HBL8 299 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 CYTL1Q9NRR1 136 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 OR5V1Q9UGF6 321 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 MED31Q9Y3C7 131 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 ADGRB1O14514 1584 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 CCDC88AQ3V6T2 1871 aa4.3□□□□□ -1.72
COL3A1-205ENST00000470167 ATG2AQ2TAZ0 1938 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TRGV10A0A0A0MS01 117 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TRAV24A0A0B4J272 114 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 LOC102723971A0A1B0GUV8 181 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PRSS29PA6NIE9 313 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF850A8MQ14 1090 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM250H0YL14 139 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 EEF1E1O43324 174 aaKnown RBP4.29□□□□□ -1.72
COL3A1-205ENST00000470167 DIRAS1O95057 198 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 AMY1AP04745 511 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 LINC00032P0C843 101 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SLC25A6P12236 298 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 GPD1P21695 349 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 MARCKSL1P49006 195 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TAS2R46P59540 309 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SLC25A11Q02978 314 aaKnown RBP4.29□□□□□ -1.72
COL3A1-205ENST00000470167 FOXI1Q12951 378 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 FHL3Q13643 280 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PMCHL1Q16048 86 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PLK5Q496M5 336 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 CRB2Q5IJ48 1285 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PAGE3Q5JUK9 113 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 UBE2NLQ5JXB2 153 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF684Q5T5D7 378 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TSPO2Q5TGU0 170 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 Q5XG85 94 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 OR2T5Q6IEZ7 315 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TRIM40Q6P9F5 258 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PAQR6Q6TCH4 344 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 C17orf64Q86WR6 236 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SLC35F2Q8IXU6 374 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM86AQ8N2M4 240 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 CLDN19Q8N6F1 224 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 GCSAMQ8N6F7 178 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SCCPDHQ8NBX0 429 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 OR4C16Q8NGL9 310 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 OR2T29Q8NH02 315 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 OR8S1Q8NH09 359 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 GATAD1Q8WUU5 269 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SMIM4Q8WVI0 70 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 RASL10AQ92737 203 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 MAL2Q969L2 176 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 MRPL53Q96EL3 112 aaKnown RBP4.29□□□□□ -1.72
COL3A1-205ENST00000470167 TVP23CQ96ET8 276 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 ATP5SQ99766 215 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SFXN3Q9BWM7 321 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 RETNQ9HD89 108 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 NUDT4Q9NZJ9 180 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SLC2A6Q9UGQ3 507 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.29□□□□□ -1.72
COL3A1-205ENST00000470167 PARP14Q460N5 1801 aa4.29□□□□□ -1.72
COL3A1-205ENST00000470167 SBF1O95248 1867 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SCN9AQ15858 1988 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 LOC107984640A0A0U1RRK4 108 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 TRDV1A0A1B0GX56 115 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 FAM231BA6NCW3 169 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms