RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CD36P16671 472 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 CDK2P24941 298 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 HTR1DP28221 377 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 BLVRBP30043 206 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-208ENST00000469585 SAA4P35542 130 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 OR3A1P47881 315 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 RPS11P62280 158 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTCD3-208ENST00000469585 RPL36AP83881 106 aaKnown RBP5.03□□□□□ -1.6
PTCD3-208ENST00000469585 GAGE5Q13069 117 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 GAGE6Q13070 117 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 CBX3Q13185 183 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TAF9Q16594 264 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 MINOS1Q5TGZ0 78 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 C22orf42Q6IC83 251 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 SLC35E4Q6ICL7 350 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 LAIR2Q6ISS4 152 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 HEPN1Q6WQI6 88 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 PNKDQ8N490 385 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 C3orf56Q8N813 242 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 ZNF485Q8NCK3 441 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 OR4S1Q8NGB4 309 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 OR10A7Q8NGE5 316 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 OR4F5Q8NH21 305 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 AP3S1Q92572 193 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TNFRSF14Q92956 283 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 RPEQ96AT9 228 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 MALSU1Q96EH3 234 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 FGF23Q9GZV9 251 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-208ENST00000469585 SIRPDQ9H106 197 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TMEM133Q9H2Q1 129 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 NCOR1P1Q9H4R4 102 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 BANF2Q9H503 90 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TNFRSF19Q9NS68 423 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 OPN4Q9UHM6 478 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 RAB22AQ9UL26 194 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 AK6Q9Y3D8 172 aaKnown RBP5.03□□□□□ -1.6
PTCD3-208ENST00000469585 MINOS1-NBL1R4GNA1 71 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 MALRD1Q5VYJ5 2156 aa5.03□□□□□ -1.6
PTCD3-208ENST00000469585 TLN2Q9Y4G6 2542 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 CSMD1Q96PZ7 3565 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 IGKV1-12A0A0C4DH73 117 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 KBTBD11-OT1A0A1B0GTJ5 212 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 SMIM31A0A1B0GVY4 71 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 A0A1B0GW55 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 A0A1W2PRD5 423 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 A0A1W2PRF3 423 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 A0A1W2PRM7 423 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 C17orf98A8MV24 154 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 CLDN34H7C241 214 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 SDCBPO00560 298 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 UBE2CO00762 179 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 SLC22A1O15245 554 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 TXNL1O43396 289 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 AIREO43918 545 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 GPR137BO60478 399 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF737O75373 536 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 IGKV1D-12P01611 117 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L2P0CJ85 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L3P0CJ86 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L4P0CJ87 422 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L5P0CJ88 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L6P0CJ89 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L7P0CJ90 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 IGHV4-38-2P0DP08 117 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 CCL3L1P16619 93 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 FGF9P31371 208 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 SOX6P35712 828 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 GLIPR1P48060 266 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 FABP5Q01469 135 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 PAX2Q02962 417 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 PNRC1Q12796 327 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 MADCAM1Q13477 382 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ARFRP1Q13795 201 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 P2RY14Q15391 338 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 LRRC75BQ2VPJ9 315 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 HES5Q5TA89 166 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 C16orf87Q6PH81 154 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DUX4L9Q6RFH8 374 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 UNQ9370/PRO34162Q6UXP9 181 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ASCL4Q6XD76 172 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 C17orf107Q6ZR85 190 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 C18orf65Q6ZTR6 163 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 GPR141Q7Z602 305 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF554Q86TJ5 538 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ABHD12Q8N2K0 398 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 OR4C13Q8NGP0 309 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 OR9G1Q8NH87 305 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 MRGPRDQ8TDS7 321 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DYRK2Q92630 601 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 TOMM40LQ969M1 308 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ARL11Q969Q4 196 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 FAM3DQ96BQ1 224 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 GALMQ96C23 342 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 TBX15Q96SF7 602 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 MRPS26Q9BYN8 205 aaKnown RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 ATG5Q9H1Y0 275 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 BEX1Q9HBH7 125 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 DIABLOQ9NR28 239 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 CALYQ9NYX4 217 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 IDI2-AS1Q9NZ38 188 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms