RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 C16orf82Q7Z2V1 217 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 LYSMD2Q8IV50 215 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.56□□□□□ -0.88
VPS13D-204ENST00000469054 OR52I2Q8NH67 350 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 EAF1Q96JC9 268 aaPredicted RBP9.56□□□□□ -0.88
VPS13D-204ENST00000469054 AKR1E2Q96JD6 320 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 RBM14Q96PK6 669 aaKnown RBP9.56□□□□□ -0.88
VPS13D-204ENST00000469054 SOSTQ9BQB4 213 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 SLC25A33Q9BSK2 321 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 NPFFR1Q9GZQ6 430 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 OR2D2Q9H210 308 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 SDHAF2Q9NX18 166 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 ATRQ13535 2644 aa9.56□□□□□ -0.88
VPS13D-204ENST00000469054 FABP12A6NFH5 140 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 A6NHS1 94 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 GABARAPH6UMI1 98 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 J3QRK9 145 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 CTDSPLO15194 276 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 RBBP9O75884 186 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 PMP2P02689 132 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 HLA-DMAP28067 261 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 FCGR2CP31995 323 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 S100A5P33763 92 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 RCVRNP35243 200 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 RFX2P48378 723 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 COMPP49747 757 aaPredicted RBP9.55□□□□□ -0.88
VPS13D-204ENST00000469054 RAG2P55895 527 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 RNASE12Q5GAN4 147 aaKnown RBP9.55□□□□□ -0.88
VPS13D-204ENST00000469054 Q6ZSV7 163 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 OR5H2Q8NGV7 314 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 OR2T10Q8NGZ9 312 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 OR4F5Q8NH21 305 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 GIMAP1Q8WWP7 306 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 FCAMRQ8WWV6 532 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 EHFQ9NZC4 300 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 KLK11Q9UBX7 282 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 MTFP1Q9UDX5 166 aa9.55□□□□□ -0.88
VPS13D-204ENST00000469054 IGKV1D-13A0A0B4J2D9 117 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 SLC22A5O76082 557 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 MOSP00540 346 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 IGKV1-13P0DP09 117 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 AADACP22760 399 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 HRH1P35367 487 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 ACTBP60709 375 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 BLCAPP62952 87 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 DYRK1AQ13627 763 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 AWAT1Q58HT5 328 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 DHRS11Q6UWP2 260 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 GLDNQ6ZMI3 551 aaPredicted RBP9.54□□□□□ -0.88
VPS13D-204ENST00000469054 Q8N6K4 173 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 ZNF645Q8N7E2 425 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 DRAXINQ8NBI3 349 aaPredicted RBP9.54□□□□□ -0.88
VPS13D-204ENST00000469054 OR5AN1Q8NGI8 311 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 RANBP3Q9H6Z4 567 aaPredicted RBP9.54□□□□□ -0.88
VPS13D-204ENST00000469054 BEX1Q9HBH7 125 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 MMP24Q9Y5R2 645 aa9.54□□□□□ -0.88
VPS13D-204ENST00000469054 A0A1B0GUS0 222 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 CLPSL1A2RUU4 121 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 OR5H14A6NHG9 310 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 H0YJW9 148 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 M0QZK8 103 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 M0R1X1 148 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 PPYP01298 95 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 MDKP21741 143 aaPredicted RBP9.53□□□□□ -0.88
VPS13D-204ENST00000469054 MC5RP33032 325 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 LINC00205P59089 165 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 DGCR2P98153 550 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 SSBP1Q04837 148 aaKnown RBP9.53□□□□□ -0.88
VPS13D-204ENST00000469054 ZNF660Q6AZW8 331 aaPredicted RBP9.53□□□□□ -0.88
VPS13D-204ENST00000469054 FAM131AQ6UXB0 335 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 ZNF383Q8NA42 475 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 OR4C13Q8NGP0 309 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 OR6Q1Q8NGQ2 317 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 LINC01006Q8NI28 216 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 SMIM4Q8WVI0 70 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 RBMXL1Q96E39 390 aaKnown RBP9.53□□□□□ -0.88
VPS13D-204ENST00000469054 C5orf30Q96GV9 206 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 MOB4Q9Y3A3 225 aa9.53□□□□□ -0.88
VPS13D-204ENST00000469054 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
VPS13D-204ENST00000469054 IGLV2-14P01704 120 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 AMY1AP04745 511 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 AMY2AP04746 511 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 THBS3P49746 956 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 FXYD4P59646 89 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 ACTBL2Q562R1 376 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 VAX1Q5SQQ9 334 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 C11orf88Q6PI97 169 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 C12orf54Q6X4T0 127 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 CCDC190Q86UF4 302 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 Q8N2B8 174 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 OR8H1Q8NGG4 311 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 OR6F1Q8NGZ6 308 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 SPATA3Q8NHX4 192 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 SECTM1Q8WVN6 248 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 ZNF2Q9BSG1 426 aaPredicted RBP9.52□□□□□ -0.89
VPS13D-204ENST00000469054 ZNF702PQ9H963 129 aa9.52□□□□□ -0.89
VPS13D-204ENST00000469054 PLSCR3Q9NRY6 295 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms