RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 ST6GALNAC5Q9BVH7 336 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 C1RLQ9NZP8 487 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
COL27A1-203ENST00000468565 TRAV14DV4A0A0A6YYC5 116 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 BTBD17A6NE02 478 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 OR5H14A6NHG9 310 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 GPR137BO60478 399 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 HTR3BO95264 441 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
COL27A1-203ENST00000468565 SNU13P55769 128 aaKnown RBP11.76□□□□□ -0.53
COL27A1-203ENST00000468565 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 GSG1LQ6UXU4 331 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 ADAD2Q8NCV1 583 aaKnown RBP11.76□□□□□ -0.53
COL27A1-203ENST00000468565 OR4F5Q8NH21 305 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 OR5R1Q8NH85 324 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 CASTOR1Q8WTX7 329 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 VPREB3Q9UKI3 123 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 A0A0D9SG52 128 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 hADV38S2A0JD32 116 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 SH2D1BO14796 132 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 MGST3O14880 152 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 PSPNO60542 156 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 B3GALNT1O75752 331 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 SLC25A4P12235 298 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
COL27A1-203ENST00000468565 GABRR1P24046 479 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 DUSP1P28562 367 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 S100A12P80511 92 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 RELBQ01201 579 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 TAF9Q16594 264 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 TMEM128Q5BJH2 165 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 ZNF546Q86UE3 836 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 SGMS2Q8NHU3 365 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 TAF15Q92804 592 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL27A1-203ENST00000468565 Q96M66 194 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 ZC4H2Q9NQZ6 224 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 PLEKHJ1Q9NW61 149 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 GPR132Q9UNW8 380 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 LINC00312Q9Y6C7 94 aa11.76□□□□□ -0.53
COL27A1-203ENST00000468565 LMO1P25800 156 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 OR3A1P47881 315 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 EDDM3AQ14507 147 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 AANATQ16613 207 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 NHLRC3Q5JS37 347 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 PXT1Q8NFP0 134 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 AJUBAQ96IF1 538 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 ZNF714Q96N38 554 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 PCDHB16Q9NRJ7 776 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 EHFQ9NZC4 300 aa11.75□□□□□ -0.53
COL27A1-203ENST00000468565 CCSO14618 274 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 OR2H2O95918 312 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 OMGP23515 440 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 ELP2Q6IA86 826 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 ASCL4Q6XD76 172 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 KCTD9Q7L273 389 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 OR5AP2Q8NGF4 316 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 ZNF230Q9UIE0 474 aaPredicted RBP11.74□□□□□ -0.53
COL27A1-203ENST00000468565 A0A0B4J2A0 478 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 SIRPB1O00241 398 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 OR2F2O95006 317 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 SFT2D2O95562 160 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 COX7A1P24310 79 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 ECI1P42126 302 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 OR2F1Q13607 317 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
COL27A1-203ENST00000468565 NKAPLQ5M9Q1 402 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 LHFPL1Q86WI0 220 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 OR13D1Q8NGV5 346 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 SHPKQ9UHJ6 478 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
COL27A1-203ENST00000468565 CLPSL1A2RUU4 121 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 RRASP10301 218 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 LGALS4P56470 323 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 CYCSP99999 105 aaKnown RBP11.73□□□□□ -0.53
COL27A1-203ENST00000468565 ZNF345Q14585 488 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 Q6P435 159 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 OR11H6Q8NGC7 330 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 COQ8AQ8NI60 647 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 THAP6Q8TBB0 222 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 MRPS24Q96EL2 167 aaKnown RBP11.73□□□□□ -0.53
COL27A1-203ENST00000468565 SEC22AQ96IW7 307 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 IL36GQ9NZH8 169 aa11.73□□□□□ -0.53
COL27A1-203ENST00000468565 UBE2J1Q9Y385 318 aaPredicted RBP11.73□□□□□ -0.53
COL27A1-203ENST00000468565 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
COL27A1-203ENST00000468565 C5orf51A6NDU8 294 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 DBX1A6NMT0 343 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 ODF3BA8MYP8 253 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 ZNF44P15621 663 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms