RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MOGAT2Q3SYC2 334 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 SGPP2Q8IWX5 399 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 Q8N1Y9 231 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 TOMM5Q8N4H5 51 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 POC5Q8NA72 575 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 DEDD2Q8WXF8 326 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 TRIM63Q969Q1 353 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 SPACA1Q9HBV2 294 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 RBFOX1Q9NWB1 397 aaKnown RBP11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 MTCH1Q9NZJ7 389 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 HSF4Q9ULV5 492 aa11.41□□□□□ -0.58
HMGXB4-206ENST00000466438 A0A0A6YYD4 124 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 OVOL1O14753 267 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 SOCS1O15524 211 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 CA11O75493 328 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 RBBP9O75884 186 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 MMP23AO75900 390 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 PTTG1O95997 202 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 CNTFRP26992 372 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 FAUP35544 74 aaKnown RBP11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 GDNFP39905 211 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 CBX5P45973 191 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 NPBWR2P48146 333 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 IFITM3Q01628 133 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 ASAH1Q13510 395 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 PIGYQ3MUY2 71 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 CDNFQ49AH0 187 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 SPIN3Q5JUX0 258 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 OR52W1Q6IF63 320 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 MZT2BQ6NZ67 158 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 OR52I2Q8NH67 350 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 C7orf50Q9BRJ6 194 aaKnown RBP11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 HES4Q9HCC6 221 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 PLEKHJ1Q9NW61 149 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 GLS2Q9UI32 602 aa11.4□□□□□ -0.58
HMGXB4-206ENST00000466438 TMEM235A6NFC5 223 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 LINC01548A6NM66 108 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 FOXI3A8MTJ6 420 aaPredicted RBP11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 MFNGO00587 321 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 GEMIN2O14893 280 aaKnown RBP11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 PDCD6O75340 191 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 OR7C1O76099 320 aaPredicted RBP11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 CD3GP09693 182 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 GNB3P16520 340 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 RCVRNP35243 200 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 ZNF616Q08AN1 781 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 ARFRP1Q13795 201 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 HLA-DRB5Q30154 266 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 TRIM16LQ309B1 348 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 RPP25LQ8N5L8 163 aaKnown RBP11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 OR1N2Q8NGR9 330 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 GPX8Q8TED1 209 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 ARHGAP5-AS1Q96IT6 56 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 PECRQ9BY49 303 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 IFT46Q9NQC8 304 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 MTFP1Q9UDX5 166 aa11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 ZNF107Q9UII5 783 aaPredicted RBP11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 RBMX2Q9Y388 322 aaKnown RBP11.39□□□□□ -0.59
HMGXB4-206ENST00000466438 LY6LH3BQJ8 138 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 TMEM11P17152 192 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 FUT3P21217 361 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 ERVK11-1P61568 191 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 DYRK1AQ13627 763 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 TRAPPC6BQ86SZ2 158 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 DCUN1D4Q92564 292 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
HMGXB4-206ENST00000466438 NAP1L6A6NFF2 107 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 LYRM1O43325 122 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 ORC5O43913 435 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 IGHG4P01861 327 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 GLAP06280 429 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 CD34P28906 385 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 GPR12P47775 334 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 SNU13P55769 128 aaKnown RBP11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 TMEM50BP56557 158 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 TAS2R19P59542 299 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 HES1Q14469 280 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 RBM39Q14498 530 aaKnown RBP11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 PLAC9Q5JTB6 97 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 ATAD3CQ5T2N8 411 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 BATF2Q8N1L9 274 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 TPRX1Q8N7U7 411 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 OR56B4Q8NH76 319 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 ENKURQ8TC29 256 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 GHITMQ9H3K2 345 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 TBC1D24Q9ULP9 559 aa11.37□□□□□ -0.59
HMGXB4-206ENST00000466438 LINC00854A0A1B0GVQ3 168 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 ANKRD20A5PA0PJZ0 165 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 FAM172BPA6NC97 362 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 MCRIP1C9JLW8 97 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 I3L521 148 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 SH2D1BO14796 132 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 LANCL1O43813 399 aa11.36□□□□□ -0.59
HMGXB4-206ENST00000466438 PTHLHP12272 177 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms