RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 C6orf201Q7Z4U5 140 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 PPP1R27Q86WC6 154 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 Q8N1Y9 231 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 TCTEX1D1Q8N7M0 179 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 SETD9Q8NE22 299 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 OR6Q1Q8NGQ2 317 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 ABHD5Q8WTS1 349 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 PIPOXQ9P0Z9 390 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 SLC23A1Q9UHI7 598 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 GAB2Q9UQC2 676 aa7.46□□□□□ -1.22
USP39-212ENST00000465514 OR5H14A6NHG9 310 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 H0YJW9 148 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 H7C2Y5 167 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 HSPB1P04792 205 aaKnown RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 OR8U9P0C7N5 309 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 UBBP0CG47 229 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 MAPK3P27361 379 aaPredicted RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 HTR2CP28335 458 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 MC5RP33032 325 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 WNT4P56705 351 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 RPS27AP62979 156 aaKnown RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 PITPNAQ00169 270 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 INSL4Q14641 139 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 ACTBL2Q562R1 376 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 C4orf48Q5BLP8 95 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 LAIR2Q6ISS4 152 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 ZNF880Q6PDB4 577 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 CD200R1LQ6Q8B3 271 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 UNQ5815/PRO19632Q6UWF5 114 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 SGPP2Q8IWX5 399 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 SVOPQ8N4V2 548 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 DHRSXQ8N5I4 330 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 SETD6Q8TBK2 473 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 THRSPQ92748 146 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 ABHD14BQ96IU4 210 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 MS4A10Q96PG2 267 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 OR4C12Q96R67 309 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 CLCC1Q96S66 551 aa7.45□□□□□ -1.22
USP39-212ENST00000465514 FAM103A1Q9BTL3 118 aaKnown RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 PARP12Q9H0J9 701 aaKnown RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 CHMP1AQ9HD42 196 aaPredicted RBP7.45□□□□□ -1.22
USP39-212ENST00000465514 MYL12BO14950 172 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 RBBP9O75884 186 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 NAPSAO96009 420 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
USP39-212ENST00000465514 TPPP2P59282 170 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 ACSM3Q53FZ2 586 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 AKIRIN2Q53H80 203 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 C1orf100Q5SVJ3 147 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 RNLSQ5VYX0 342 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 PYHIN1Q6K0P9 492 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 AHSA2Q719I0 299 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 LRRTM1Q86UE6 522 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 HAPLN4Q86UW8 402 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 NANOGP1Q8N7R0 232 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 LFNGQ8NES3 379 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 KCNG3Q8TAE7 436 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 FLYWCH2Q96CP2 140 aaKnown RBP7.44□□□□□ -1.22
USP39-212ENST00000465514 RHOVQ96L33 236 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 NICN1Q9BSH3 213 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 ST6GALNAC5Q9BVH7 336 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 TMEM59Q9BXS4 323 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 KCNK15Q9H427 330 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 CNOT2Q9NZN8 540 aaKnown RBP7.44□□□□□ -1.22
USP39-212ENST00000465514 METTL1Q9UBP6 276 aaKnown RBP7.44□□□□□ -1.22
USP39-212ENST00000465514 PSORS1C1Q9UIG5 152 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 RNF150Q9ULK6 438 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 WASHC3Q9Y3C0 194 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
USP39-212ENST00000465514 A0A0A6YYD4 124 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 ITGB1BP1O14713 200 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 GNAO1P09471 354 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 MED14OSP0DP75 135 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 CD40LGP29965 261 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 CEACAM6P40199 344 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 UNC119Q13432 240 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 PSG5Q15238 335 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 RBM48Q5RL73 367 aaKnown RBP7.43□□□□□ -1.22
USP39-212ENST00000465514 GLT8D1Q68CQ7 371 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 ZNF562Q6V9R5 426 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 MOB1BQ7L9L4 216 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 PACRGLQ8N7B6 248 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 DRAXINQ8NBI3 349 aaPredicted RBP7.43□□□□□ -1.22
USP39-212ENST00000465514 BPIFB6Q8NFQ5 453 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 PHYHIPQ92561 330 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 RNF5Q99942 180 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 AGMATQ9BSE5 352 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 ELOVL1Q9BW60 279 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 TM2D1Q9BX74 207 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 C11orf54Q9H0W9 315 aaPredicted RBP7.43□□□□□ -1.22
USP39-212ENST00000465514 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 PLCXD1Q9NUJ7 323 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 PLEKHJ1Q9NW61 149 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 OR1A1Q9P1Q5 309 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 HERC1Q15751 4861 aa7.43□□□□□ -1.22
USP39-212ENST00000465514 TRBV6-6A0A0A6YYG2 114 aa7.42□□□□□ -1.22
USP39-212ENST00000465514 TMEM14DPA8MWL7 114 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms