RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ATP5G1P05496 136 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 CD79BP40259 229 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 CD200P41217 278 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 TAS2R45P59539 299 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 HERVK_113P63121 156 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 TMEM267Q0VDI3 215 aaPredicted RBP1.71□□□□□ -2.14
CLK1-208ENST00000464454 FAM19A5Q7Z5A7 132 aaPredicted RBP1.71□□□□□ -2.14
CLK1-208ENST00000464454 OR10D3Q8NH80 312 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 C16orf78Q8WTQ4 265 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 DNAJB3Q8WWF6 145 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 DHRS9Q9BPW9 319 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 TIPINQ9BVW5 301 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 OR51B6Q9H340 312 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 C16orf95Q9H693 158 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 HDGFL3Q9Y3E1 203 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 ATG2BQ96BY7 2078 aa1.71□□□□□ -2.14
CLK1-208ENST00000464454 ICE1Q9Y2F5 2266 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 TINCRA0A1B0GVN0 87 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 C19orf71A6NCJ1 209 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 KNCNA6PVL3 124 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 LY6LH3BQJ8 138 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 SLC17A3O00476 420 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 MRASO14807 208 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 BIRC5O15392 142 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 GSTZ1O43708 216 aaPredicted RBP1.7□□□□□ -2.14
CLK1-208ENST00000464454 ZNF189O75820 626 aaPredicted RBP1.7□□□□□ -2.14
CLK1-208ENST00000464454 CRHBPP24387 322 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 OR10J1P30954 320 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 CA7P43166 264 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 DAPP51397 102 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 CTAG1AP78358 180 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 BTN3A2P78410 334 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 OR2D3Q8NGH3 330 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 Q8WTZ3 238 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 ASB13Q8WXK3 278 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 SMIM19Q96E16 107 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 ARL5BQ96KC2 179 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 DNAJC30Q96LL9 226 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 MS4A6AQ9H2W1 248 aa1.7□□□□□ -2.14
CLK1-208ENST00000464454 TEX50A0A1B0GTY4 177 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 GOLGA8KD6RF30 607 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 GOLGA8MH3BSY2 632 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 TPM3P06753 285 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 P0DMU3 169 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 FAM231AP0DMU4 169 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 FAM231CP0DMU5 169 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 IFNGR2P38484 337 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 PSMD8P48556 350 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 RPL14P50914 215 aaKnown RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 UBE2IP63279 158 aaKnown RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 HPCAP84074 193 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 MED21Q13503 144 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 EBPQ15125 230 aaKnown RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 TMEM251Q8N6I4 163 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 Q8NDZ9 215 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 TMBIM1Q969X1 311 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 MS4A6EQ96DS6 147 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 PACRGQ96M98 296 aaPredicted RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 NKX6-2Q9C056 277 aaPredicted RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 NSRP1Q9H0G5 558 aaKnown RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 PLEKHJ1Q9NW61 149 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 EMC3Q9P0I2 261 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 C15orf41Q9Y2V0 281 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 SAMHD1Q9Y3Z3 626 aaKnown RBP1.69□□□□□ -2.14
CLK1-208ENST00000464454 THSD7AQ9UPZ6 1657 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 PLXNA3P51805 1871 aa1.69□□□□□ -2.14
CLK1-208ENST00000464454 A0A0A6YYH2 397 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 A0A1W2PQL4 384 aaPredicted RBP1.68□□□□□ -2.14
CLK1-208ENST00000464454 A6NJ64 397 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 FNDC10F2Z333 226 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 H3BPC8 53 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 COCHO43405 550 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 IL6P05231 212 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 GZMBP10144 247 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 UGT2B7P16662 529 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 CD36P16671 472 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 CXCL2P19875 107 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 CXCL3P19876 107 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 TPM4P67936 248 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 FABP5Q01469 135 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 MGAT3Q09327 533 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 SS18Q15532 418 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 TMEM31Q5JXX7 168 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 BAP18Q8IXM2 172 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 CPNE2Q96FN4 548 aaPredicted RBP1.68□□□□□ -2.14
CLK1-208ENST00000464454 KCTD7Q96MP8 289 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 TXNDC17Q9BRA2 123 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 CXCL16Q9H2A7 254 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 CHD5Q8TDI0 1954 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 COL4A2P08572 1712 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 ARHGAP32A7KAX9 2087 aa1.68□□□□□ -2.14
CLK1-208ENST00000464454 MPDZO75970 2070 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 MUC21A0A0G2JKD1 596 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 MUC21A0A140T8X8 626 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 TMEM235A6NFC5 223 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 F5H768 121 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 M0R381 172 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 UBE2L6O14933 153 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms