RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 IGKV1D-33P01593 117 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 IGKV1-33P01594 117 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 VSIG10L2P0DP72 767 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 RCVRNP35243 200 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 ARPC4P59998 168 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 ACTBP60709 375 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 ARSJQ5FYB0 599 aaPredicted RBP13.6□□□□□ -0.23
VPS52-215ENST00000464425 C16orf82Q7Z2V1 217 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 TGIF2LXQ8IUE1 241 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 OR2AK2Q8NG84 335 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 OR52I2Q8NH67 350 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 SGMS2Q8NHU3 365 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 SMIM4Q8WVI0 70 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 RTN4IP1Q8WWV3 396 aaPredicted RBP13.6□□□□□ -0.23
VPS52-215ENST00000464425 EDARADDQ8WWZ3 215 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 RBMXL1Q96E39 390 aaKnown RBP13.6□□□□□ -0.23
VPS52-215ENST00000464425 AKR1E2Q96JD6 320 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 CITED1Q99966 193 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 KLK11Q9UBX7 282 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 V9GYH0 126 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 TMEM11P17152 192 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 TAS2R46P59540 309 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 ABCA11PQ4W5N1 156 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 H1FOOQ8IZA3 346 aaPredicted RBP13.59□□□□□ -0.23
VPS52-215ENST00000464425 Q8N2B8 174 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 GINS4Q9BRT9 223 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 AGMATQ9BSE5 352 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 SERTAD4Q9NUC0 356 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 NECAP2Q9NVZ3 263 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 RDH8Q9NYR8 311 aa13.59□□□□□ -0.23
VPS52-215ENST00000464425 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
VPS52-215ENST00000464425 RBMX2Q9Y388 322 aaKnown RBP13.59□□□□□ -0.23
VPS52-215ENST00000464425 ZNF736B4DX44 427 aaPredicted RBP13.58□□□□□ -0.24
VPS52-215ENST00000464425 ST8SIA5O15466 376 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 AMY1AP04745 511 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 AMY2AP04746 511 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 OR3A3P47888 321 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 ZNF137PP52743 207 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 DGCR2P98153 550 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 CDK10Q15131 360 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 TMEM95Q3KNT9 176 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 HIST2H2BDQ6DRA6 164 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 KLHDC1Q8N7A1 406 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 C11orf44Q8N8P7 122 aa13.58□□□□□ -0.24
VPS52-215ENST00000464425 PARP12Q9H0J9 701 aaKnown RBP13.58□□□□□ -0.24
VPS52-215ENST00000464425 C11orf54Q9H0W9 315 aaPredicted RBP13.58□□□□□ -0.24
VPS52-215ENST00000464425 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 ZNF45Q02386 682 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 ZNF79Q15937 498 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 C9orf152Q5JTZ5 239 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 C11orf88Q6PI97 169 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 DHRS11Q6UWP2 260 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 OVCH2Q7RTZ1 564 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 ODF3L1Q8IXM7 274 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 EAF1Q96JC9 268 aaPredicted RBP13.57□□□□□ -0.24
VPS52-215ENST00000464425 TAS2R8Q9NYW2 309 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 MOB4Q9Y3A3 225 aa13.57□□□□□ -0.24
VPS52-215ENST00000464425 RAB29O14966 203 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 TXNL1O43396 289 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 LANCL1O43813 399 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 PEX14O75381 377 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 TUSC2O75896 110 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 FCER2P06734 321 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 TBPP20226 339 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 HLA-DMAP28067 261 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 VDAC2P45880 294 aaPredicted RBP13.56□□□□□ -0.24
VPS52-215ENST00000464425 DYRK1AQ13627 763 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 ACTBL2Q562R1 376 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 PYDC2Q56P42 97 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 TMEM229BQ8NBD8 167 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 OR5H2Q8NGV7 314 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 GIMAP1Q8WWP7 306 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 MRPL20Q9BYC9 149 aaKnown RBP13.56□□□□□ -0.24
VPS52-215ENST00000464425 IFI27L2Q9H2X8 130 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 PIPOXQ9P0Z9 390 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 GAB2Q9UQC2 676 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 OR2W1Q9Y3N9 320 aa13.56□□□□□ -0.24
VPS52-215ENST00000464425 SAA2-SAA4A0A096LPE2 208 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 NCBP2LA6PVI3 153 aaKnown RBP13.55□□□□□ -0.24
VPS52-215ENST00000464425 M0QZK8 103 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 CSF1P09603 554 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 SAA2P0DJI9 122 aaPredicted RBP13.55□□□□□ -0.24
VPS52-215ENST00000464425 CD1BP29016 333 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 HRH1P35367 487 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 RFX2P48378 723 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 TAS2R19P59542 299 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 EBI3Q14213 229 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
VPS52-215ENST00000464425 FAM71F2Q6NXP2 309 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 Q8N402 240 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 GDPD1Q8N9F7 314 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 OR2T10Q8NGZ9 312 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 ABHD14BQ96IU4 210 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
VPS52-215ENST00000464425 RNF150Q9ULK6 438 aa13.55□□□□□ -0.24
VPS52-215ENST00000464425 TRRAPQ9Y4A5 3859 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 MOSP00540 346 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 PMP2P02689 132 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 CD74P04233 296 aa13.54□□□□□ -0.24
VPS52-215ENST00000464425 NFYAP23511 347 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms