RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RPS20P60866 119 aaKnown RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 DAZ2Q13117 558 aaKnown RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 ELOCQ15369 112 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 IAH1Q2TAA2 248 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 LINC00303Q3SY05 128 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 MPV17L2Q567V2 206 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 TMEM78Q5T7P6 136 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 HES3Q5TGS1 186 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 Q6P435 159 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 TBPL2Q6SJ96 375 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 SBSNQ6UWP8 590 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 DAZ4Q86SG3 579 aaKnown RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 OOSP2Q86WS3 158 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 CLVS1Q8IUQ0 354 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 ZBTB8OSQ8IWT0 167 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 OSR2Q8N2R0 312 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 LY6G5BQ8NDX9 201 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 OR2M3Q8NG83 312 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 APOBEC3DQ96AK3 386 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 C16orf74Q96GX8 76 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 THTPAQ9BU02 230 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 CHAC1Q9BUX1 264 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 C1orf50Q9BV19 199 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 FGF23Q9GZV9 251 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 LRTM1Q9HBL6 345 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 SND1-IT1Q9HBX3 110 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 TMEM138Q9NPI0 162 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 DAZ1Q9NQZ3 744 aaKnown RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 DAZ3Q9NR90 486 aaKnown RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 RSL24D1Q9UHA3 163 aaKnown RBP2.59□□□□□ -1.99
ITGB1-208ENST00000464001 LINC00527Q9UJ94 153 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 HSPB11Q9Y547 144 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 PXMP4Q9Y6I8 212 aa2.59□□□□□ -1.99
ITGB1-208ENST00000464001 UBR2Q8IWV8 1755 aa2.59□□□□□ -2
ITGB1-208ENST00000464001 DENND4BO75064 1496 aaPredicted RBP2.58□□□□□ -2
ITGB1-208ENST00000464001 CEP170Q5SW79 1584 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 C5orf63A6NC05 138 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 MAP1LC3B2A6NCE7 125 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 CD300LBA8K4G0 201 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 C4orf51C9J302 202 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 SEC11BP0C7V7 166 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 SCGB1C2P0DMR2 95 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 C1GALT1C1LP0DN25 315 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 IFI30P13284 250 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ADRB3P13945 408 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 CTSEP14091 401 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 CRISP2P16562 243 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 HSPA9P38646 679 aaKnown RBP2.58□□□□□ -2
ITGB1-208ENST00000464001 CXCL5P42830 114 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ZNF136P52737 540 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 DEFA3P59666 94 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 AP1S1P61966 158 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
ITGB1-208ENST00000464001 RAP1AP62834 184 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 HERVK_113P63121 156 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 GNG5P63218 68 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 BTN1A1Q13410 526 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 MPPED2Q15777 294 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 TMEM241Q24JQ0 296 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 TMEM128Q5BJH2 165 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 SAMD13Q5VXD3 122 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 IL34Q6ZMJ4 242 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 GOLT1AQ6ZVE7 132 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 FA2HQ7L5A8 372 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 TCF23Q7RTU1 214 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 MKXQ8IYA7 352 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 LRRC18Q8N456 261 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ZNF561Q8N587 486 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 LINC01555Q8NAE3 123 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ZNF439Q8NDP4 499 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ZNF555Q8NEP9 628 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 OR10G4Q8NGN3 311 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 OR1L1Q8NH94 360 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 FAM57AQ8TBR7 257 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 SCGB1C1Q8TD33 95 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 LZICQ8WZA0 190 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 C12orf43Q96C57 262 aaKnown RBP2.58□□□□□ -2
ITGB1-208ENST00000464001 TMEM101Q96IK0 257 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 YPEL4Q96NS1 127 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 TSC22D3Q99576 134 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 CDX2Q99626 313 aaPredicted RBP2.58□□□□□ -2
ITGB1-208ENST00000464001 TMEM147Q9BVK8 224 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 MAP1LC3BQ9GZQ8 125 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 OR52D1Q9H346 318 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 CDC42EP4Q9H3Q1 356 aaKnown RBP2.58□□□□□ -2
ITGB1-208ENST00000464001 PRNDQ9UKY0 176 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ANAPC10Q9UM13 185 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 RFNGQ9Y644 331 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 NID2Q14112 1375 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 ROBO3Q96MS0 1386 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 NLRC5Q86WI3 1866 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 MEGF6O75095 1541 aa2.58□□□□□ -2
ITGB1-208ENST00000464001 REREQ9P2R6 1566 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 TRAV8-1A0A0A6YYK1 113 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 IGKV1-6A0A0C4DH72 117 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 A0A1W2PRE2 83 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 TMEM72A0PK05 275 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 TRAPPC13A5PLN9 417 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 KNCNA6PVL3 124 aa2.57□□□□□ -2
ITGB1-208ENST00000464001 F5H5P2 479 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms