RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MUC1P15941 1255 aaPredicted RBP10.6□□□□□ -0.71
VAPB-203ENST00000463370 PVALBP20472 110 aaPredicted RBP10.6□□□□□ -0.71
VAPB-203ENST00000463370 ZP3P21754 424 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
VAPB-203ENST00000463370 NCR3LG1Q68D85 454 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 SSX8Q7RTT4 187 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 HSD17B11Q8NBQ5 300 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 IFI27L2Q9H2X8 130 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 NARFLQ9H6Q4 476 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 OR6C3Q9NZP0 311 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 JPT1Q9UK76 154 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 CACNA1AO00555 2505 aa10.6□□□□□ -0.71
VAPB-203ENST00000463370 SHOXO15266 292 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 YPEL1O60688 119 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 MED6O75586 246 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 P0C879 139 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 AKR1C1Q04828 323 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 SWI5Q1ZZU3 235 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 FBXL19-AS1Q494R0 122 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 PXDC1Q5TGL8 231 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 OR5C1Q8NGR4 320 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 LRRC20Q8TCA0 184 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 YPEL2Q96QA6 119 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 DIRC2Q96SL1 478 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 PRORYQ9H606 182 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 KCNJ16Q9NPI9 418 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 ANKHD1Q8IWZ3 2542 aaKnown RBP10.59□□□□□ -0.71
VAPB-203ENST00000463370 KBTBD11-OT1A0A1B0GTJ5 212 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 TMEM178BH3BS89 294 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 C1QL1O75973 258 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 GPR12P47775 334 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 FHITP49789 147 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 SULT1A2P50226 295 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 DYNLT3P51808 116 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 EIF5AP63241 154 aaKnown RBP10.59□□□□□ -0.71
VAPB-203ENST00000463370 TMEM267Q0VDI3 215 aaPredicted RBP10.59□□□□□ -0.71
VAPB-203ENST00000463370 FAM209AQ5JX71 171 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 HRH4Q9H3N8 390 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 CLN8Q9UBY8 286 aa10.59□□□□□ -0.71
VAPB-203ENST00000463370 COL6A6A6NMZ7 2263 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 MED19A0JLT2 244 aaPredicted RBP10.58□□□□□ -0.72
VAPB-203ENST00000463370 LRRC30A6NM36 301 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 CD3EP07766 207 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 DUTP33316 252 aaKnown RBP10.58□□□□□ -0.72
VAPB-203ENST00000463370 CATR1Q13166 79 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 MARC2Q969Z3 335 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 GINS3Q9BRX5 216 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 DYNLRB1Q9NP97 96 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 ZNRD1Q9P1U0 126 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 MMP24Q9Y5R2 645 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 SESN1Q9Y6P5 492 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 DYSFO75923 2080 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
VAPB-203ENST00000463370 HRNRQ86YZ3 2850 aaPredicted RBP10.58□□□□□ -0.72
VAPB-203ENST00000463370 USF3Q68DE3 2245 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 TRGV10A0A0A0MS01 117 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 SYNGR2O43760 224 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 SPP1P10451 314 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 NDUFB7P17568 137 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 MSMO1Q15800 293 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 CT45A1Q5HYN5 189 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 LYPD2Q6UXB3 125 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 ZNF66Q6ZN08 573 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 BPIFCQ8NFQ6 507 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 CT45A3Q8NHU0 189 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 MS4A7Q9GZW8 240 aaPredicted RBP10.58□□□□□ -0.72
VAPB-203ENST00000463370 C19orf12Q9NSK7 152 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 TMEM106BQ9NUM4 274 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 PKD1L2Q7Z442 2459 aa10.58□□□□□ -0.72
VAPB-203ENST00000463370 TXNL1O43396 289 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 MMP9P14780 707 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 NFYBP25208 207 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 APOBEC3AP31941 199 aaPredicted RBP10.57□□□□□ -0.72
VAPB-203ENST00000463370 ARHGDIBP52566 201 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 ZNF273Q14593 569 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 MIDNQ504T8 468 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 PRAMEF5Q5TYX0 476 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 HSD17B10Q99714 261 aaKnown RBP10.57□□□□□ -0.72
VAPB-203ENST00000463370 EGLN1Q9GZT9 426 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 GFOD1Q9NXC2 390 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 CISD1Q9NZ45 108 aaKnown RBP10.57□□□□□ -0.72
VAPB-203ENST00000463370 COQ3Q9NZJ6 369 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 NDRG3Q9UGV2 375 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 TPRP12270 2363 aaKnown RBP10.57□□□□□ -0.72
VAPB-203ENST00000463370 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 BORCS7-ASMTA0A0B4J1R7 106 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 M0R1X1 148 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 EIF5AL1Q6IS14 154 aaKnown RBP10.57□□□□□ -0.72
VAPB-203ENST00000463370 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 SLC25A31Q9H0C2 315 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 NCOR1P1Q9H4R4 102 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 TMEM231Q9H6L2 316 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 PPIAL4AQ9Y536 164 aa10.57□□□□□ -0.72
VAPB-203ENST00000463370 LYNX1G3V0Z9 82 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms