RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 FAM106CPP0CH98 169 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 ZP3P21754 424 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 RAB4BP61018 213 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 SELENOTP62341 195 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 RHOVQ96L33 236 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 GFI1Q99684 422 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 MAP1LC3BQ9GZQ8 125 aa9.97□□□□□ -0.81
RBM39-223ENST00000463004 MS4A7Q9GZW8 240 aaPredicted RBP9.97□□□□□ -0.81
RBM39-223ENST00000463004 LOC105371242A0A075B767 164 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 TRBV6-7A0A0A0MS04 114 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 TRAV39A0A0B4J263 110 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 CELA3BP08861 270 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 GLIPR1P48060 266 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 ACSM6Q6P461 480 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 OR4F5Q8NH21 305 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 OR2T6Q8NHC8 308 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 LINC01560Q8TB33 94 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 OR4F4Q96R69 305 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 TXNDC17Q9BRA2 123 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 TECRQ9NZ01 308 aaKnown RBP9.96□□□□□ -0.81
RBM39-223ENST00000463004 KBTBD11-OT1A0A1B0GTJ5 212 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 XKRY2A2RUG3 117 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.81
RBM39-223ENST00000463004 HNF1AP20823 631 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 G6PCP35575 357 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 PAQR4Q8N4S7 273 aaPredicted RBP9.96□□□□□ -0.81
RBM39-223ENST00000463004 OR52M1Q8NGK5 317 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 OR4C13Q8NGP0 309 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 ANGPTL6Q8NI99 470 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 OSR1Q8TAX0 266 aaPredicted RBP9.96□□□□□ -0.81
RBM39-223ENST00000463004 MRPL30Q8TCC3 161 aaKnown RBP9.96□□□□□ -0.81
RBM39-223ENST00000463004 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.81
RBM39-223ENST00000463004 GNB4Q9HAV0 340 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 OR51B2Q9Y5P1 312 aa9.96□□□□□ -0.81
RBM39-223ENST00000463004 FREM3P0C091 2139 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 YPEL1O60688 119 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.82
RBM39-223ENST00000463004 ADIRFQ15847 76 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 WDR82Q6UXN9 313 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 Q6ZS49 121 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 SMIM8Q96KF7 97 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 YPEL2Q96QA6 119 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 ALPK3Q96L96 1907 aa9.96□□□□□ -0.82
RBM39-223ENST00000463004 LINC00862A6NCI5 91 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 SRRM5B3KS81 715 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 C12orf77C9JDV5 145 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 ZNF205O95201 554 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 CFDP00746 253 aaPredicted RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 CEACAM8P31997 349 aaPredicted RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 RPL27AP46776 148 aaKnown RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 HSPE1P61604 102 aaKnown RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 FOXF2Q12947 444 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 FGFRL1Q8N441 504 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 TMEM252Q8N6L7 170 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 OR4F17Q8NGA8 305 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 PATZ1Q9HBE1 687 aaKnown RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 GOSR1O95249 250 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 ERVS71-1P61550 626 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 UBAC2Q8NBM4 344 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 OR10G9Q8NGN4 311 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 OR10G7Q8NGN6 311 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 TNFRSF14Q92956 283 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 RPUSD4Q96CM3 377 aaKnown RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 SMIM7Q9BQ49 75 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 ELF5Q9UKW6 265 aaPredicted RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 RHBDL1O75783 438 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 AKR1C3P42330 323 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 HAGHQ16775 308 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 BTNL8Q6UX41 500 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 ZNF497Q6ZNH5 498 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 DRAM1Q8N682 238 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 SLC24A4Q8NFF2 622 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 RBFOX2O43251 390 aaKnown RBP eCLIP9.95□□□□□ -0.823e-6■■□□□ 13
RBM39-223ENST00000463004 PNRC1Q12796 327 aaPredicted RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 ANKRD55Q3KP44 614 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 MISP3Q96FF7 219 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 MRPL37Q9BZE1 423 aaKnown RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 SLC35B3Q9H1N7 401 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 NPVFQ9HCQ7 196 aa9.95□□□□□ -0.82
RBM39-223ENST00000463004 LYRM2Q9NU23 88 aaPredicted RBP9.95□□□□□ -0.82
RBM39-223ENST00000463004 S100A8P05109 93 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 CRYBA1P05813 215 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 OR13C7P0DN81 318 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 RPL8P62917 257 aaKnown RBP9.94□□□□□ -0.82
RBM39-223ENST00000463004 TEPPQ6URK8 271 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 DNM1P46Q6ZS02 220 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 TIMM9Q9Y5J7 89 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 Q56UQ5 140 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 AVPI1Q5T686 147 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 ABHD12Q8N2K0 398 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 AAMDCQ9H7C9 122 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 TMEM41BQ5BJD5 291 aa9.94□□□□□ -0.82
RBM39-223ENST00000463004 TPRX1Q8N7U7 411 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms