RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 AMY1AP04745 511 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 EIF4EP06730 217 aaKnown RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 SCTP09683 121 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 GNB3P16520 340 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 KIR2DS4P43632 304 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 SERPINB10P48595 397 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 RAB7AP51149 207 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 RORCP51449 518 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 ELLP55199 621 aaPredicted RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 LSM3P62310 102 aaKnown RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 EIF4EBP1Q13541 118 aaPredicted RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 GNMTQ14749 295 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 KIR2DS1Q14954 304 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 MSMO1Q15800 293 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 LRRC75BQ2VPJ9 315 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 CDNFQ49AH0 187 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 IDNKQ5T6J7 187 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 C16orf87Q6PH81 154 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 C5orf24Q7Z6I8 188 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 TRAPPC6BQ86SZ2 158 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 HOGA1Q86XE5 327 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 CLVS1Q8IUQ0 354 aaPredicted RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 H1FOOQ8IZA3 346 aaPredicted RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 OR8H3Q8N146 312 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 RFESDQ8TAC1 157 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 GPX8Q8TED1 209 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 C22orf15Q8WYQ4 148 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 SNAPC3Q92966 411 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 GALMQ96C23 342 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 CMSS1Q9BQ75 279 aaKnown RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 CHIAQ9BZP6 476 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 PARP12Q9H0J9 701 aaKnown RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 C16orf95Q9H693 158 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 RANBP3Q9H6Z4 567 aaPredicted RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 ZNF580Q9UK33 172 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 TRAPPC2LQ9UL33 140 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 TCF19Q9Y242 345 aa4.58□□□□□ -1.68
VPS36-202ENST00000462289 RBMX2Q9Y388 322 aaKnown RBP4.58□□□□□ -1.68
VPS36-202ENST00000462289 TMEM235A6NFC5 223 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 TRIM77I1YAP6 450 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 SULT1C2O00338 296 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 SDCBPO00560 298 aaPredicted RBP4.57□□□□□ -1.68
VPS36-202ENST00000462289 CTDSPLO15194 276 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 FABP7O15540 132 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 TXNL1O43396 289 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 CHST1O43916 411 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 GPR137BO60478 399 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 ARG1P05089 322 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 ELK1P19419 428 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 COX7A1P24310 79 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 PPP1CCP36873 323 aaKnown RBP4.57□□□□□ -1.68
VPS36-202ENST00000462289 ETV6P41212 452 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 PRRX1P54821 245 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 TAS2R20P59543 309 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 KRTAP10-11P60412 298 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 MADCAM1Q13477 382 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 DIAPH2-AS1Q14236 149 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 CCDC144NLQ6NUI1 221 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 C16orf82Q7Z2V1 217 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 PDZD9Q8IXQ8 264 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 SAMD12Q8N8I0 201 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.57□□□□□ -1.68
VPS36-202ENST00000462289 SPATA3Q8NHX4 192 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 CCDC107Q8WV48 283 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 NUDCD2Q8WVJ2 157 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 RTN4IP1Q8WWV3 396 aaPredicted RBP4.57□□□□□ -1.68
VPS36-202ENST00000462289 TMEM158Q8WZ71 300 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 AP3S1Q92572 193 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 C5orf30Q96GV9 206 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 SSX3Q99909 188 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 ATG5Q9H1Y0 275 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 DPAGT1Q9H3H5 408 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 SCPEP1Q9HB40 452 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 PLSCR3Q9NRY6 295 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 C1RLQ9NZP8 487 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 SLC23A1Q9UHI7 598 aa4.57□□□□□ -1.68
VPS36-202ENST00000462289 ZNF107Q9UII5 783 aaPredicted RBP4.57□□□□□ -1.68
VPS36-202ENST00000462289 AMMECR1Q9Y4X0 333 aaPredicted RBP4.57□□□□□ -1.68
VPS36-202ENST00000462289 TRAV18A0A075B6X5 111 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 SAA2-SAA4A0A096LPE2 208 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 IGHV1-3A0A0C4DH29 117 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 H3BUX3 64 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CTDSP2O14595 271 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 HSD17B6O14756 317 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 FGF16O43320 207 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 HPGDSO60760 199 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 RGS11O94810 467 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 OR2F2O95006 317 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CD3GP09693 182 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CTXN2P0C2S0 81 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 GSTT2P0CG29 244 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 GSTT2BP0CG30 244 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 ZBTB25P24278 435 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CD1BP29016 333 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CEACAM3P40198 252 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CBX5P45973 191 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 PROK1P58294 105 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 BAMBIQ13145 260 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms