RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CDKL4Q5MAI5 379 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 N4BP2L1Q5TBK1 243 aaPredicted RBP1.58□□□□□ -2.16
VCL-203ENST00000461383 RASL11AQ6T310 242 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 ZNF322Q6U7Q0 402 aaPredicted RBP1.58□□□□□ -2.16
VCL-203ENST00000461383 SDIM1Q6ZPB5 146 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 RASSF6Q6ZTQ3 369 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 BAP18Q8IXM2 172 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 TMEM156Q8N614 296 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 OR11H1Q8NG94 326 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 OR2V1Q8NHB1 315 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 TESCQ96BS2 214 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 CAPZA3Q96KX2 299 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 TMEM109Q9BVC6 243 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 PARVGQ9HBI0 331 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 HES4Q9HCC6 221 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 UBAP1Q9NZ09 502 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 EMC3Q9P0I2 261 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 HHLA2Q9UM44 414 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 HSPE1-MOB4S4R3N1 261 aa1.58□□□□□ -2.16
VCL-203ENST00000461383 MPDZO75970 2070 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 A0A1W2PNM2 257 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 DHRS12A0PJE2 317 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 VPS37CA5D8V6 355 aaPredicted RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 LY6HO94772 140 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 C8orf88P0DMB2 117 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 IGHV3-30-3P0DP02 117 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 CBR1P16152 277 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 GZMHP20718 246 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 RPL12P30050 165 aaKnown RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 OR10J1P30954 320 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 OPRM1P35372 400 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 CD200P41217 278 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 AP2S1P53680 142 aaPredicted RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 RWDD2BP57060 319 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 TMEM33P57088 247 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 LINC00313P59037 77 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 SNAP25P60880 206 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 MAGOHP61326 146 aaKnown RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 HLA-DRB3P79483 266 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 ZNF117Q03924 483 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 TMEM31Q5JXX7 168 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 AMTNQ6UX39 209 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 LRRN1Q6UXK5 716 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 HIST2H3AQ71DI3 136 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 COMMD7Q86VX2 200 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 OR2D3Q8NGH3 330 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 C12orf43Q96C57 262 aaKnown RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 MS4A6EQ96DS6 147 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 ANKRD36BP1Q96IX9 119 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 MBOAT7Q96N66 472 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 MRPS26Q9BYN8 205 aaKnown RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 AICDAQ9GZX7 198 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 SMDT1Q9H4I9 107 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 FKBP14Q9NWM8 211 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 TXNL4BQ9NX01 149 aaKnown RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 DKKL1Q9UK85 242 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 POLR1DQ9Y2S0 133 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 PCYT1BQ9Y5K3 369 aaPredicted RBP1.57□□□□□ -2.16
VCL-203ENST00000461383 PTPRJQ12913 1337 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 ABCC11Q96J66 1382 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 ARHGAP32A7KAX9 2087 aa1.57□□□□□ -2.16
VCL-203ENST00000461383 IGHV3-73A0A0B4J1V6 119 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 GRIFINA4D1Z8 144 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 SMIM23A6NLE4 172 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 C17orf98A8MV24 154 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 CXCR6O00574 342 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 UBFD1O14562 309 aaKnown RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 ZNF73O43830 326 aaPredicted RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 HLA-DQB2P05538 268 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 IL3P08700 152 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 RPS12P25398 132 aaKnown RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 DDTP30046 118 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 DAPP51397 102 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 TSPEAR-AS2P59090 65 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 FGF12P61328 243 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 JOSD1Q15040 202 aaPredicted RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 LPCAT4Q643R3 524 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 SMARCD3Q6STE5 483 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 ZNF567Q8N184 647 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 EEF1AKMT1Q8WVE0 214 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 RAB8BQ92930 207 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 GNB1LQ9BYB4 327 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 NKX6-2Q9C056 277 aaPredicted RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 TUBA4BQ9H853 241 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 SLC2A9Q9NRM0 540 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 BABAM2Q9NXR7 383 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 HEY1Q9Y5J3 304 aa1.56□□□□□ -2.16
VCL-203ENST00000461383 V9GYY5 206 aaPredicted RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 DICER1Q9UPY3 1922 aaKnown RBP1.56□□□□□ -2.16
VCL-203ENST00000461383 LTBP4Q8N2S1 1624 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 SHANK3Q9BYB0 1731 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 LTBP2Q14767 1821 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 MYO16Q9Y6X6 1858 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 J3QRE1 110 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 M0R381 172 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 MT-CO2P00403 227 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 SOD1P00441 154 aa1.55□□□□□ -2.16
VCL-203ENST00000461383 LGALS3P17931 250 aaKnown RBP1.55□□□□□ -2.16
VCL-203ENST00000461383 NPPCP23582 126 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms