RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CD82P27701 267 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 COL10A1Q03692 680 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 OR10A7Q8NGE5 316 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 WDYHV1Q96HA8 205 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 LOXL4Q96JB6 756 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 ABHD14AQ9BUJ0 271 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 HNF1AP20823 631 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 PRAMEF6Q5VXH4 476 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 VWA1Q6PCB0 445 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 SSX7Q7RTT5 188 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 NECAP1Q8NC96 275 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 C22orf15Q8WYQ4 148 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 MPC1Q9Y5U8 109 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
LMNB1-203ENST00000460265 MMP9P14780 707 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 TNFSF10P50591 281 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 TLE1Q04724 770 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 OR2C3Q8N628 320 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 DEFB108BQ8NET1 73 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 OR5C1Q8NGR4 320 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 OR1A1Q9P1Q5 309 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 SH2D1BO14796 132 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 KRASP01116 189 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 IRF2P14316 349 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 RPS2P15880 293 aaKnown RBP13.09□□□□□ -0.31
LMNB1-203ENST00000460265 ZNF83P51522 516 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 TMEM42Q69YG0 159 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 SARAFQ96BY9 339 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 DLL3Q9NYJ7 618 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 POLDIP2Q9Y2S7 368 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 TRAV17A0A0B4J275 112 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 CHST1O43916 411 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 OR10V1Q8NGI7 309 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 Q9N2K0 584 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 FKBP11Q9NYL4 201 aa13.09□□□□□ -0.31
LMNB1-203ENST00000460265 WNT9BO14905 357 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 RAC2P15153 192 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 EDDM3BP56851 147 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 IL15RAQ13261 267 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 OR8G2PQ6IF36 304 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 SCGB1C1Q8TD33 95 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 GINS3Q9BRX5 216 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 LAMP3Q9UQV4 416 aa13.08□□□□□ -0.31
LMNB1-203ENST00000460265 OR5B21A6NL26 309 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 KLK10O43240 276 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 IFNA5P01569 189 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 PSG2P11465 335 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 TFPI2P48307 235 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 AESQ08117 197 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 AARDQ4LEZ3 155 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 SPANXN5Q5MJ07 72 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 FAM214BQ7L5A3 538 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 SCCPDHQ8NBX0 429 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 IGF2RP11717 2491 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 CTXN2P0C2S0 81 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 TMEM267Q0VDI3 215 aaPredicted RBP13.08□□□□□ -0.32
LMNB1-203ENST00000460265 ZNF816Q0VGE8 651 aaPredicted RBP13.08□□□□□ -0.32
LMNB1-203ENST00000460265 SLC35E3Q7Z769 313 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 ZADH2Q8N4Q0 377 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 MRGPRDQ8TDS7 321 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 OR5P3Q8WZ94 311 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 PLK3Q9H4B4 646 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 LPAR2Q9HBW0 351 aa13.08□□□□□ -0.32
LMNB1-203ENST00000460265 COL5A1P20908 1838 aaPredicted RBP13.08□□□□□ -0.32
LMNB1-203ENST00000460265 GPR137BO60478 399 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 SRPXP78539 464 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 WDR25Q64LD2 544 aaPredicted RBP13.07□□□□□ -0.32
LMNB1-203ENST00000460265 C20orf204Q6ZNR8 217 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 OR2Z1Q8NG97 314 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 RRP8O43159 456 aaKnown RBP13.07□□□□□ -0.32
LMNB1-203ENST00000460265 RUNX1Q01196 453 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 MPV17LQ2QL34 196 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 ATRXP46100 2492 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 M0R1B8 84 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 OR2H2O95918 312 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 IGHV1-2P23083 117 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 ZNF154Q13106 437 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 BCL2L2Q92843 193 aaPredicted RBP13.07□□□□□ -0.32
LMNB1-203ENST00000460265 GMPPAQ96IJ6 420 aaPredicted RBP13.07□□□□□ -0.32
LMNB1-203ENST00000460265 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 VAX2Q9UIW0 290 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 ATP23Q9Y6H3 246 aa13.07□□□□□ -0.32
LMNB1-203ENST00000460265 J3QT63 122 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 ELLP55199 621 aaPredicted RBP13.06□□□□□ -0.32
LMNB1-203ENST00000460265 P2RY6Q15077 328 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 PARD6AQ9NPB6 346 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 GNG12Q9UBI6 72 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 CACNG5Q9UF02 275 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 C20orf202A1L168 122 aa13.06□□□□□ -0.32
LMNB1-203ENST00000460265 FOXI3A8MTJ6 420 aaPredicted RBP13.06□□□□□ -0.32
LMNB1-203ENST00000460265 PPP5D1E7EU14 171 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms