RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SS18L1O75177 396 aaPredicted RBP13.35□□□□□ -0.27
CMTM3-203ENST00000460097 TUSC2O75896 110 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 TMEM50AO95807 157 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 TYMSP04818 313 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 EPHA1P21709 976 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 ASCL1P50553 236 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 FUT6P51993 359 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 PAX9P55771 341 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 RAB35Q15286 201 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 CXorf66Q5JRM2 361 aaPredicted RBP13.35□□□□□ -0.27
CMTM3-203ENST00000460097 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 TUSC5Q8IXB3 177 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 TMEM170AQ8WVE7 144 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 BORCS8Q96FH0 119 aa13.35□□□□□ -0.27
CMTM3-203ENST00000460097 SPTBN1Q01082 2364 aaKnown RBP13.34□□□□□ -0.27
CMTM3-203ENST00000460097 DOPEY1Q5JWR5 2465 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 IGKV1-27A0A075B6S5 117 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 FAM90A27PA6NNH2 459 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 DHHO43323 396 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 MRPS34P82930 218 aaKnown RBP13.34□□□□□ -0.27
CMTM3-203ENST00000460097 ACOT6Q3I5F7 207 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-203ENST00000460097 WDR25Q64LD2 544 aaPredicted RBP13.34□□□□□ -0.27
CMTM3-203ENST00000460097 C5orf24Q7Z6I8 188 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 STARD4Q96DR4 205 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 BTF3L4Q96K17 158 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 GNG13Q9P2W3 67 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 RFNGQ9Y644 331 aa13.34□□□□□ -0.27
CMTM3-203ENST00000460097 INTS1Q8N201 2190 aaKnown RBP13.34□□□□□ -0.27
CMTM3-203ENST00000460097 TMEM250H0YL14 139 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 CHST1O43916 411 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 OMGP23515 440 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 CLDN17P56750 224 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 RBM11P57052 281 aaKnown RBP13.33□□□□□ -0.28
CMTM3-203ENST00000460097 IQCJQ1A5X6 159 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 VWA1Q6PCB0 445 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 TMEM123Q8N131 208 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 R3HDM4Q96D70 268 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 Q9N2K0 584 aa13.33□□□□□ -0.28
CMTM3-203ENST00000460097 ANGPTL7O43827 346 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 CST7O76096 145 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 RUNX1Q01196 453 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 TMEM18Q96B42 140 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 PSMG3-AS1Q96PY0 264 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 SF3B5Q9BWJ5 86 aaKnown RBP13.32□□□□□ -0.28
CMTM3-203ENST00000460097 PLSCR4Q9NRQ2 329 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 RPRMQ9NS64 109 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 ST3GAL6Q9Y274 331 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 IGKV3D-15A0A087WSY6 115 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 IGKV1-12A0A0C4DH73 117 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 A1L4Q6 167 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF716A6NP11 495 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 SPRY1O43609 319 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-203ENST00000460097 IGKV1D-12P01611 117 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 COL10A1Q03692 680 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 SNAI3Q3KNW1 292 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 Q6ZPA2 131 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 OR51G1Q8NGK1 321 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 SCGB1C1Q8TD33 95 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 ANAPC16Q96DE5 110 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 JKAMPQ9P055 326 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 OR14J1Q9UGF5 321 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 PROCRQ9UNN8 238 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 TIMM9Q9Y5J7 89 aa13.32□□□□□ -0.28
CMTM3-203ENST00000460097 LRP5LA4QPB2 252 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 KIAA1324LA8MWY0 1029 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-203ENST00000460097 KBTBD11O94819 623 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 CLDN1O95832 211 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 NRASP01111 189 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 CGAP01215 116 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 CST2P09228 141 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF154Q13106 437 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 NCR3LG1Q68D85 454 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 NUFIP2Q7Z417 695 aaKnown RBP13.31□□□□□ -0.28
CMTM3-203ENST00000460097 THNSL2Q86YJ6 484 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 RBM14Q96PK6 669 aaKnown RBP13.31□□□□□ -0.28
CMTM3-203ENST00000460097 HIST1H2AAQ96QV6 131 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 REPIN1Q9BWE0 567 aaKnown RBP13.31□□□□□ -0.28
CMTM3-203ENST00000460097 C12orf49Q9H741 205 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 SLC7A10Q9NS82 523 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 PLEK2Q9NYT0 353 aa13.31□□□□□ -0.28
CMTM3-203ENST00000460097 KIR2DS1A0A191URI9 304 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 XKRY2A2RUG3 117 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 A8MXE2 369 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 M0QZK8 103 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 SYNGR3O43761 229 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 GGCTO75223 188 aaKnown RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 NAPSAO96009 420 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 METTL15P1P0C7V9 234 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 S100GP29377 79 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 SRP14P37108 136 aaKnown RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 KIR2DS4P43632 304 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 KIR2DS1Q14954 304 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 USF2Q15853 346 aaPredicted RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 TMEM241Q24JQ0 296 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 PIGYQ3MUY2 71 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms