RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LDLRAD4O15165 306 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 CD37P11049 281 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 ZP3P21754 424 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 TPPP2P59282 170 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 OR10K2Q6IF99 312 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 LRRTM1Q86UE6 522 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 LFNGQ8NES3 379 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 CASTOR1Q8WTX7 329 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 ABHD14BQ96IU4 210 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 CYYR1Q96J86 154 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 TM2D3Q9BRN9 247 aa16.56■□□□□ 0.24
CPNE1-220ENST00000458038 RANGRFQ9HD47 186 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-220ENST00000458038 H3BUA1 57 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 IGHV3-11P01762 117 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 CPEP16870 476 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 SRMP19623 302 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 CEACAM6P40199 344 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 PSG5Q15238 335 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 MOGAT2Q3SYC2 334 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 GLDNQ6ZMI3 551 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-220ENST00000458038 AHSA2Q719I0 299 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 ANKRD13BQ86YJ7 626 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 SETD6Q8TBK2 473 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 PTX4Q96A99 478 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 MS4A10Q96PG2 267 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 URM1Q9BTM9 101 aaKnown RBP16.55■□□□□ 0.24
CPNE1-220ENST00000458038 GAB2Q9UQC2 676 aa16.55■□□□□ 0.24
CPNE1-220ENST00000458038 A0A0G2JLM5 398 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 TMEM14DPA8MWL7 114 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 IGLV1-51P01701 117 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 TRGV3P03979 118 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 QRFPP83859 136 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 UNC119Q13432 240 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 RBM48Q5RL73 367 aaKnown RBP16.54■□□□□ 0.24
CPNE1-220ENST00000458038 RNLSQ5VYX0 342 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 CLCC1Q96S66 551 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 C11orf54Q9H0W9 315 aaPredicted RBP16.54■□□□□ 0.24
CPNE1-220ENST00000458038 ZNF221Q9UK13 617 aa16.54■□□□□ 0.24
CPNE1-220ENST00000458038 APOA2P02652 100 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 IGHV4-30-4P0DP06 118 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 RANBP1P43487 201 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 RPS16P62249 146 aaKnown RBP16.53■□□□□ 0.24
CPNE1-220ENST00000458038 SRSF7Q16629 238 aaKnown RBP eCLIP16.53■□□□□ 0.241e-7■□□□□ 9.8
CPNE1-220ENST00000458038 PDPNQ86YL7 162 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 SGPP2Q8IWX5 399 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 OR6M1Q8NGM8 313 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 FBLIM1Q8WUP2 373 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 TMEM68Q96MH6 324 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 NICN1Q9BSH3 213 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 FAM103A1Q9BTL3 118 aaKnown RBP16.53■□□□□ 0.24
CPNE1-220ENST00000458038 MND1Q9BWT6 205 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 HSF4Q9ULV5 492 aa16.53■□□□□ 0.24
CPNE1-220ENST00000458038 C13orf42A0A1B0GVH6 325 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 EBAG9O00559 213 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 CA2P00918 260 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 HLA-DRB3P79483 266 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 FXYD3Q14802 87 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 HSD17B12Q53GQ0 312 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 LAIR2Q6ISS4 152 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 Q8N1Y9 231 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 FAM89BQ8N5H3 189 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 BPIFB6Q8NFQ5 453 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 PARP12Q9H0J9 701 aaKnown RBP16.52■□□□□ 0.24
CPNE1-220ENST00000458038 C19orf73Q9NVV2 129 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 FKBP14Q9NWM8 211 aa16.52■□□□□ 0.24
CPNE1-220ENST00000458038 GNAO1P09471 354 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 INSL4Q14641 139 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 CEACAM19Q7Z692 300 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 POC5Q8NA72 575 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-220ENST00000458038 ISOC1Q96CN7 298 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 TMED9Q9BVK6 235 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 C12orf4Q9NQ89 552 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 ZNF355PQ9NSJ1 428 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 AK3Q9UIJ7 227 aa16.51■□□□□ 0.23
CPNE1-220ENST00000458038 LCE6AA0A183 80 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 H0Y980 276 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 PROP1O75360 226 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 BRI3O95415 125 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 IGKV1-16P04430 117 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 UCHL1P09936 223 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 LGALS7P47929 136 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 DRAXINQ8NBI3 349 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-220ENST00000458038 RSRP1Q9BUV0 290 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 LPAR5Q9H1C0 372 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 Q9N2K0 584 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 OR1A1Q9P1Q5 309 aa16.5■□□□□ 0.23
CPNE1-220ENST00000458038 DYNC2H1Q8NCM8 4307 aaKnown RBP16.49■□□□□ 0.23
CPNE1-220ENST00000458038 A0A0A6YYD4 124 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 SOCS1O15524 211 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 CNIH1O95406 144 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 ARSBP15848 533 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 AADACP22760 399 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 KLF5Q13887 457 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-220ENST00000458038 SPHARQ15513 63 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 ZNF383Q8NA42 475 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 GRPEL2Q8TAA5 225 aa16.49■□□□□ 0.23
CPNE1-220ENST00000458038 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 SLC17A2O00624 439 aa16.48■□□□□ 0.23
CPNE1-220ENST00000458038 SLC25A17O43808 307 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms