RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FAM74A3Q4VXF1 159 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 C2orf83Q53S99 150 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 CALHM1Q8IU99 346 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 MYO16Q9Y6X6 1858 aa16.96■□□□□ 0.31
SNX27-204ENST00000458013 A0A1W2PQF6 199 aa16.96■□□□□ 0.3
SNX27-204ENST00000458013 GZMMP51124 257 aa16.96■□□□□ 0.3
SNX27-204ENST00000458013 RAXQ9Y2V3 346 aa16.96■□□□□ 0.3
SNX27-204ENST00000458013 DLX6P56179 175 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 SRXN1Q9BYN0 137 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 C21orf140B9A014 251 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 SLC25A17O43808 307 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 ZG16O60844 167 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 LINC00596Q86U02 117 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 MS4A5Q9H3V2 200 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 SELENOHQ8IZQ5 122 aaKnown RBP16.95■□□□□ 0.3
SNX27-204ENST00000458013 CXorf51AA0A1B0GTR3 108 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 CYB5R2Q6BCY4 276 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 ST6GALNAC3Q8NDV1 305 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 RPL27AP46776 148 aaKnown RBP16.95■□□□□ 0.3
SNX27-204ENST00000458013 TGIF1Q15583 401 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 PARLQ9H300 379 aa16.95■□□□□ 0.3
SNX27-204ENST00000458013 LRP5O75197 1615 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 PGLYRP1O75594 196 aaPredicted RBP16.94■□□□□ 0.3
SNX27-204ENST00000458013 ZFP36L2P47974 494 aaKnown RBP16.94■□□□□ 0.3
SNX27-204ENST00000458013 GPR146Q96CH1 333 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 DUX5Q96PT3 197 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 NGFRP08138 427 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 CX3CL1P78423 397 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 SLC25A33Q9BSK2 321 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.94■□□□□ 0.3
SNX27-204ENST00000458013 A0A0U1RQV5 110 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 ERVFRD-1P60508 538 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 NPVFQ9HCQ7 196 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 TGFAP01135 160 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 EGR1P18146 543 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 FOXC2Q99958 501 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 MRPL13Q9BYD1 178 aaKnown RBP16.94■□□□□ 0.3
SNX27-204ENST00000458013 THY1P04216 161 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 ASAH2BP0C7U1 165 aa16.94■□□□□ 0.3
SNX27-204ENST00000458013 ZNF256Q9Y2P7 627 aaPredicted RBP16.94■□□□□ 0.3
SNX27-204ENST00000458013 TMEM177Q53S58 311 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 OIT3Q8WWZ8 545 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 RAB24Q969Q5 203 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 KIAA1217Q5T5P2 1943 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 RND2P52198 227 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 CDCP2Q5VXM1 449 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 LSM10Q969L4 123 aaKnown RBP16.93■□□□□ 0.3
SNX27-204ENST00000458013 SSBP3Q9BWW4 388 aaPredicted RBP16.93■□□□□ 0.3
SNX27-204ENST00000458013 UNC119Q13432 240 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 NFAM1Q8NET5 270 aaPredicted RBP16.93■□□□□ 0.3
SNX27-204ENST00000458013 REPIN1Q9BWE0 567 aaKnown RBP16.93■□□□□ 0.3
SNX27-204ENST00000458013 CISD1Q9NZ45 108 aaKnown RBP16.93■□□□□ 0.3
SNX27-204ENST00000458013 ADAMTSL3P82987 1691 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 DSPPQ9NZW4 1301 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 LINC00862A6NCI5 91 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 ARF6P62330 175 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 FHITP49789 147 aa16.93■□□□□ 0.3
SNX27-204ENST00000458013 C4orf51C9J302 202 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 SIAH2O43255 324 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 SRSF12Q8WXF0 261 aaKnown RBP16.92■□□□□ 0.3
SNX27-204ENST00000458013 TMEM262E9PQX1 116 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 S1PR2O95136 353 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 ANOS1P23352 680 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 MBNL2Q5VZF2 373 aaKnown RBP16.92■□□□□ 0.3
SNX27-204ENST00000458013 AMY1AP04745 511 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 SMIM6P0DI80 62 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 FUT5Q11128 374 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 CALYQ9NYX4 217 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 MOSP00540 346 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 NPBWR2P48146 333 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 EMP1P54849 157 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 ABHD12Q8N2K0 398 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 QTRT1Q9BXR0 403 aaKnown RBP16.92■□□□□ 0.3
SNX27-204ENST00000458013 hCG_38984A0A1B0GV85 526 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 SNAI2O43623 268 aa16.92■□□□□ 0.3
SNX27-204ENST00000458013 ZNF501Q96CX3 271 aaPredicted RBP16.92■□□□□ 0.3
SNX27-204ENST00000458013 M0QZK8 103 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 GGCTO75223 188 aaKnown RBP16.91■□□□□ 0.3
SNX27-204ENST00000458013 FAM106CPP0CH98 169 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 CRYBB3P26998 211 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 STPG2Q8N412 459 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 KLRB1Q12918 225 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 CLEC2AQ6UVW9 174 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 PHLDA3Q9Y5J5 127 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 GAGE10A6NGK3 116 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 DLL1O00548 723 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 CDS2O95674 445 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 COX6B1P14854 86 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 FGF12P61328 243 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 ZNF56Q15929 161 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 COL5A1-AS1Q5SY13 56 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 SYT8Q8NBV8 401 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 SEC11BP0C7V7 166 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 TRBV5-3A0A0A0MS03 114 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 PSMB11A5LHX3 300 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 PPP1R17O96001 155 aa16.91■□□□□ 0.3
SNX27-204ENST00000458013 PRSS2P07478 247 aa16.9■□□□□ 0.3
SNX27-204ENST00000458013 LGALS3P17931 250 aaKnown RBP16.9■□□□□ 0.3
SNX27-204ENST00000458013 NRIP2Q9BQI9 281 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms