RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 COX7A1P24310 79 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 UCP1P25874 307 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 REG1BP48304 166 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 PDLIM4P50479 330 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 SRSF4Q08170 494 aaKnown RBP7.11□□□□□ -1.27
RIF1-208ENST00000457745 ABCA11PQ4W5N1 156 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 GGNBP1Q5YKI7 109 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 Q6ZRM9 215 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
RIF1-208ENST00000457745 TCTE3Q8IZS6 198 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 ZNF645Q8N7E2 425 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 SLC35G3Q8N808 338 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 ZNF383Q8NA42 475 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 MAPK1IP1LQ8NDC0 245 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 C17orf50Q8WW18 174 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 DDB2Q92466 427 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 TNFRSF14Q92956 283 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 TIMD4Q96H15 378 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 ZNF486Q96H40 463 aaPredicted RBP7.11□□□□□ -1.27
RIF1-208ENST00000457745 ABHD14AQ9BUJ0 271 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 SSBP3Q9BWW4 388 aaPredicted RBP7.11□□□□□ -1.27
RIF1-208ENST00000457745 GSX2Q9BZM3 304 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
RIF1-208ENST00000457745 SIRT7Q9NRC8 400 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 MIOXQ9UGB7 285 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 SHPKQ9UHJ6 478 aa7.11□□□□□ -1.27
RIF1-208ENST00000457745 TET2Q6N021 2002 aaPredicted RBP7.1□□□□□ -1.27
RIF1-208ENST00000457745 ANKRD17O75179 2603 aaKnown RBP7.1□□□□□ -1.27
RIF1-208ENST00000457745 WNK2Q9Y3S1 2297 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 A0A087X0M5 115 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 TRBV23-1A0A0A0MS06 115 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 A0A1B0GX30 115 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 A0A1W2PRD5 423 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 A0A1W2PRF3 423 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 A0A1W2PRM7 423 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 M0R1X1 148 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 ZNF16P17020 682 aaPredicted RBP7.1□□□□□ -1.27
RIF1-208ENST00000457745 HLA-GP17693 338 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 F2RP25116 425 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 DUTP33316 252 aaKnown RBP7.1□□□□□ -1.27
RIF1-208ENST00000457745 ARF6P62330 175 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 GNB2P62879 340 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 XP32Q5T750 250 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 TMEM268Q5VZI3 342 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 PDZD9Q8IXQ8 264 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 LYG1Q8N1E2 194 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 DYNAPQ8N1N2 210 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 OR52M1Q8NGK5 317 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 FAM168AQ92567 244 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 ST6GALNAC6Q969X2 333 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 AJUBAQ96IF1 538 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 TBX15Q96SF7 602 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 MRPL20Q9BYC9 149 aaKnown RBP7.1□□□□□ -1.27
RIF1-208ENST00000457745 TMEM222Q9H0R3 208 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 SIRPDQ9H106 197 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 ONECUT1Q9UBC0 465 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 SOX21Q9Y651 276 aaPredicted RBP7.1□□□□□ -1.27
RIF1-208ENST00000457745 SESN1Q9Y6P5 492 aa7.1□□□□□ -1.27
RIF1-208ENST00000457745 CELSR2Q9HCU4 2923 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 LOC105371242A0A075B767 164 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 IGHV2-70DA0A0C4DH43 119 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 A8MXK9 166 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 FAM25EA8MYX2 175 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 H0Y980 276 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 S1PR2O95136 353 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 NXPH3O95157 252 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 HNRNPCP07910 306 aaKnown RBP eCLIP7.09□□□□□ -1.27
RIF1-208ENST00000457745 GIPP09681 153 aaPredicted RBP7.09□□□□□ -1.27
RIF1-208ENST00000457745 P0C879 139 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 CT45A6P0DMU7 189 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 CT45A5P0DMU8 189 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 CT45A7P0DMV0 189 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 ANXA3P12429 323 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 MMP9P14780 707 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 ECI1P42126 302 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 LPAR6P43657 344 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 GPR12P47775 334 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 EIF2B2P49770 351 aaKnown RBP7.09□□□□□ -1.27
RIF1-208ENST00000457745 ZNF816Q0VGE8 651 aaPredicted RBP7.09□□□□□ -1.27
RIF1-208ENST00000457745 KCNJ8Q15842 424 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 NMSQ5H8A3 153 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 LHFPL4Q7Z7J7 247 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 SGPP2Q8IWX5 399 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 LRTM2Q8N967 370 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 ZNF596Q8TC21 504 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 GPR146Q96CH1 333 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 RITA1Q96K30 269 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 TMEM56Q96MV1 263 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 SCGB3A2Q96PL1 93 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 TMEM133Q9H2Q1 129 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 GAL3ST2Q9H3Q3 398 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 RBM7Q9Y580 266 aaKnown RBP7.09□□□□□ -1.27
RIF1-208ENST00000457745 TMEM56-RWDD3S4R434 201 aa7.09□□□□□ -1.27
RIF1-208ENST00000457745 FASNP49327 2511 aaKnown RBP7.09□□□□□ -1.27
RIF1-208ENST00000457745 PRRC2AP48634 2157 aaKnown RBP7.09□□□□□ -1.27
RIF1-208ENST00000457745 PDZD2O15018 2839 aa7.09□□□□□ -1.28
RIF1-208ENST00000457745 APCP25054 2843 aa7.08□□□□□ -1.28
RIF1-208ENST00000457745 IGHV2-26A0A0B4J1V2 119 aa7.08□□□□□ -1.28
RIF1-208ENST00000457745 TRAV3A0A0B4J244 114 aa7.08□□□□□ -1.28
RIF1-208ENST00000457745 C13orf42A0A1B0GVH6 325 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms