RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 C1orf147Q96MC9 270 aaPredicted RBP8.24□□□□□ -1.09
LINC01940-201ENST00000455228 P2RX4Q99571 388 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 CITED1Q99966 193 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 PECRQ9BY49 303 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 UBE2ZQ9H832 354 aaPredicted RBP8.24□□□□□ -1.09
LINC01940-201ENST00000455228 NPVFQ9HCQ7 196 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 KLRF1Q9NZS2 232 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 ANAPC10Q9UM13 185 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 NSG2Q9Y328 171 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 PHF3Q92576 2039 aaKnown RBP8.24□□□□□ -1.09
LINC01940-201ENST00000455228 COL4A2P08572 1712 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 TMEM131Q92545 1883 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 A0A087WX48 190 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 A0A0G2JMM0 328 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 A0A1W2PPB8 328 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 KIR3DP1A8MWS1 328 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 K7EQM0 130 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 LINC01565O15544 149 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 FCGR2AP12318 317 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 CD99P14209 185 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 MRPS21P82921 87 aaKnown RBP8.24□□□□□ -1.09
LINC01940-201ENST00000455228 Q0VG73 95 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 LTC4SQ16873 150 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 SP6Q3SY56 376 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 OR8I2Q8N0Y5 310 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 CLDND2Q8NHS1 167 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 APOBEC3DQ96AK3 386 aaPredicted RBP8.24□□□□□ -1.09
LINC01940-201ENST00000455228 RBMXL1Q96E39 390 aaKnown RBP8.24□□□□□ -1.09
LINC01940-201ENST00000455228 VCANP13611 3396 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 GAGE12HA6NDE8 117 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 F5H5K5 113 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 C15orf65H3BRN8 121 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 S100GP29377 79 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 ECI1P42126 302 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 NPBWR2P48146 333 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 C6orf201Q7Z4U5 140 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 C1QL2Q7Z5L3 287 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 TCTEX1D1Q8N7M0 179 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 FAM213BQ8TBF2 198 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 NPFFR1Q9GZQ6 430 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 ALKBH4Q9NXW9 302 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 UNC13CQ8NB66 2214 aa8.24□□□□□ -1.09
LINC01940-201ENST00000455228 PSMB11A5LHX3 300 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 S1PR2O95136 353 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 NRASP01111 189 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 FASLGP48023 281 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 FXYD4P59646 89 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 HIST3H3Q16695 136 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MYO7BQ6PIF6 2116 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MED12Q93074 2177 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 LIN37Q96GY3 246 aaPredicted RBP8.23□□□□□ -1.09
LINC01940-201ENST00000455228 QTRT1Q9BXR0 403 aaKnown RBP8.23□□□□□ -1.09
LINC01940-201ENST00000455228 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 LIPT2A6NK58 231 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 IFNL4K9M1U5 179 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 SIRPB1O00241 398 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MLNRO43193 412 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 TMEM50AO95807 157 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 THBS3P49746 956 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MTCP1P56278 107 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MYBPHQ13203 477 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MFAP5Q13361 173 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 IGFBP7Q16270 282 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 PDLIM3Q53GG5 364 aaPredicted RBP8.23□□□□□ -1.09
LINC01940-201ENST00000455228 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.23□□□□□ -1.09
LINC01940-201ENST00000455228 PIGTQ969N2 578 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 VN1R1Q9GZP7 353 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 ZNF160Q9HCG1 818 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 VPREB3Q9UKI3 123 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 ATP23Q9Y6H3 246 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 NPIPB13A6NJU9 1138 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 NPIPB4C9JG80 1138 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 MMP9P14780 707 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 F2RP25116 425 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 PLP1P60201 277 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 HIST1H1AQ02539 215 aaPredicted RBP8.23□□□□□ -1.09
LINC01940-201ENST00000455228 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 DEFB119Q8N690 84 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 CHRNA10Q9GZZ6 450 aa8.23□□□□□ -1.09
LINC01940-201ENST00000455228 IGKV1-9A0A0C4DH69 117 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 ODAMA1E959 279 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 OR2T8A6NH00 312 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 SLC17A3O00476 420 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 ZNF43P17038 809 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 KLK2P20151 261 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 RPL23AP62750 156 aaKnown RBP8.22□□□□□ -1.09
LINC01940-201ENST00000455228 DEFB133Q30KQ1 61 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 PLXDC2Q6UX71 529 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 HDHD3Q9BSH5 251 aaPredicted RBP8.22□□□□□ -1.09
LINC01940-201ENST00000455228 TPPP3Q9BW30 176 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 NGBQ9NPG2 151 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 CISD1Q9NZ45 108 aaKnown RBP8.22□□□□□ -1.09
LINC01940-201ENST00000455228 SS18L2Q9UHA2 77 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 FBLL1A6NHQ2 334 aaKnown RBP8.22□□□□□ -1.09
LINC01940-201ENST00000455228 LILRA5A6NI73 299 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 K7EP34 96 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 HAND1O96004 215 aa8.22□□□□□ -1.09
LINC01940-201ENST00000455228 HRASP01112 189 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms