RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 FBXO24O75426 580 aa4□□□□□ -1.77
RIF1-207ENST00000454583 BRI3O95415 125 aa4□□□□□ -1.77
RIF1-207ENST00000454583 AMY1AP04745 511 aa4□□□□□ -1.77
RIF1-207ENST00000454583 LYNX1P0DP58 116 aa4□□□□□ -1.77
RIF1-207ENST00000454583 RCC1P18754 421 aaPredicted RBP4□□□□□ -1.77
RIF1-207ENST00000454583 GLIPR1P48060 266 aa4□□□□□ -1.77
RIF1-207ENST00000454583 IL13RA1P78552 427 aa4□□□□□ -1.77
RIF1-207ENST00000454583 TAF9Q16594 264 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CT45A1Q5HYN5 189 aa4□□□□□ -1.77
RIF1-207ENST00000454583 GGNBP1Q5YKI7 109 aa4□□□□□ -1.77
RIF1-207ENST00000454583 LIN54Q6MZP7 749 aa4□□□□□ -1.77
RIF1-207ENST00000454583 SPSB3Q6PJ21 355 aa4□□□□□ -1.77
RIF1-207ENST00000454583 FAM185AQ8N0U4 392 aa4□□□□□ -1.77
RIF1-207ENST00000454583 ZNRF1Q8ND25 227 aa4□□□□□ -1.77
RIF1-207ENST00000454583 BEND2Q8NDZ0 799 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CLDND2Q8NHS1 167 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CT45A3Q8NHU0 189 aa4□□□□□ -1.77
RIF1-207ENST00000454583 MAFIPQ8WZ33 124 aa4□□□□□ -1.77
RIF1-207ENST00000454583 LSM10Q969L4 123 aaKnown RBP4□□□□□ -1.77
RIF1-207ENST00000454583 SEC22AQ96IW7 307 aa4□□□□□ -1.77
RIF1-207ENST00000454583 NSD1Q96L73 2696 aaPredicted RBP4□□□□□ -1.77
RIF1-207ENST00000454583 PHB2Q99623 299 aa4□□□□□ -1.77
RIF1-207ENST00000454583 PPA2Q9H2U2 334 aa4□□□□□ -1.77
RIF1-207ENST00000454583 NARFLQ9H6Q4 476 aa4□□□□□ -1.77
RIF1-207ENST00000454583 MBD2Q9UBB5 411 aa4□□□□□ -1.77
RIF1-207ENST00000454583 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
RIF1-207ENST00000454583 INSIG2Q9Y5U4 225 aa4□□□□□ -1.77
RIF1-207ENST00000454583 POMT1Q9Y6A1 747 aa4□□□□□ -1.77
RIF1-207ENST00000454583 IGHV2-70DA0A0C4DH43 119 aa4□□□□□ -1.77
RIF1-207ENST00000454583 KBTBD11-OT1A0A1B0GTJ5 212 aa4□□□□□ -1.77
RIF1-207ENST00000454583 FAM230AA0A1W2PPH8 454 aa4□□□□□ -1.77
RIF1-207ENST00000454583 RNASEK-C17orf49H0YIS7 233 aa4□□□□□ -1.77
RIF1-207ENST00000454583 SDCBPO00560 298 aaPredicted RBP4□□□□□ -1.77
RIF1-207ENST00000454583 MPPED1O15442 326 aa4□□□□□ -1.77
RIF1-207ENST00000454583 PGLYRP1O75594 196 aaPredicted RBP4□□□□□ -1.77
RIF1-207ENST00000454583 IFNA2P01563 188 aa4□□□□□ -1.77
RIF1-207ENST00000454583 OR5H8P0DN80 308 aa4□□□□□ -1.77
RIF1-207ENST00000454583 DAOP14920 347 aa4□□□□□ -1.77
RIF1-207ENST00000454583 SULT1A2P50226 295 aa4□□□□□ -1.77
RIF1-207ENST00000454583 TSPAN5P62079 268 aa4□□□□□ -1.77
RIF1-207ENST00000454583 RAB32Q13637 225 aa4□□□□□ -1.77
RIF1-207ENST00000454583 GNMTQ14749 295 aa4□□□□□ -1.77
RIF1-207ENST00000454583 TMEM30BQ3MIR4 351 aa4□□□□□ -1.77
RIF1-207ENST00000454583 WDR25Q64LD2 544 aaPredicted RBP4□□□□□ -1.77
RIF1-207ENST00000454583 HEPN1Q6WQI6 88 aa4□□□□□ -1.77
RIF1-207ENST00000454583 BORCS8Q96FH0 119 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CPNE2Q96FN4 548 aaPredicted RBP4□□□□□ -1.77
RIF1-207ENST00000454583 MEGF9Q9H1U4 602 aa4□□□□□ -1.77
RIF1-207ENST00000454583 MS4A5Q9H3V2 200 aa4□□□□□ -1.77
RIF1-207ENST00000454583 OR1A1Q9P1Q5 309 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CLN8Q9UBY8 286 aa4□□□□□ -1.77
RIF1-207ENST00000454583 CADP27708 2225 aa4□□□□□ -1.77
RIF1-207ENST00000454583 ARHGAP32A7KAX9 2087 aa4□□□□□ -1.77
RIF1-207ENST00000454583 HIVEP1P15822 2718 aa4□□□□□ -1.77
RIF1-207ENST00000454583 RAB19A4D1S5 217 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 DEGS1O15121 323 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 OR5AC1P0C628 307 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 OR8U8P0C7N1 319 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 EGR2P11161 476 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 P2RY1P47900 373 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 CASP6P55212 293 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 ERVFRD-1P60508 538 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 ZNF816Q0VGE8 651 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 Q8N2B8 174 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 ZNF525Q8N782 197 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 RIMS4Q9H426 269 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 ELL3Q9HB65 397 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 ZNF286AQ9HBT8 521 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 RDH8Q9NYR8 311 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 RPUSD1Q9UJJ7 312 aaKnown RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 IGHV3OR15-7A0A075B7D8 119 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 LINC00473A8K010 186 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 M0R1W7 72 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 MGST3O14880 152 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 PHF1O43189 567 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 NDUFA3O95167 84 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 TMEM33P57088 247 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 UQCC3Q6UW78 93 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 SLC35G3Q8N808 338 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 OR5H2Q8NGV7 314 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 RBPMSQ93062 196 aaKnown RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 OR51B6Q9H340 312 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 ZNF665Q9H7R5 613 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 LYRM2Q9NU23 88 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 SDHAF2Q9NX18 166 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 GFOD1Q9NXC2 390 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 IGSF23A1L1A6 192 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 DVL1O14640 695 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 TXNL1O43396 289 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 SSNA1O43805 119 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 TIMM8AO60220 97 aaPredicted RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 FOXH1O75593 365 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 PGAM2P15259 253 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 CDKN1AP38936 164 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 RPL30P62888 115 aaKnown RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 CCL8P80075 99 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 DIAPH2-AS1Q14236 149 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 PDCD1Q15116 288 aa3.99□□□□□ -1.77
RIF1-207ENST00000454583 PAN3Q58A45 887 aaKnown RBP3.99□□□□□ -1.77
RIF1-207ENST00000454583 SLC22A25Q6T423 547 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms