RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 FABP6P51161 128 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 HLA-DRB3P79483 266 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 GNMTQ14749 295 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 CMTM1Q8IZ96 169 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 OR8U1Q8NH10 309 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 OR2W1Q9Y3N9 320 aa10.2□□□□□ -0.78
COL27A1-202ENST00000451716 ANKRD11Q6UB99 2663 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-202ENST00000451716 A0A0G2JRQ6 117 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 A0A1B0GV50 99 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 MLNRO43193 412 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 NHLH1Q02575 133 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 IGFL2Q6UWQ7 119 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 LINC00596Q86U02 117 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF610Q8N9Z0 462 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 MSL2Q9HCI7 577 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 PPP1R3CQ9UQK1 317 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 BSNQ9UPA5 3926 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 C9JQL5 133 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 PPP1R2P9O14990 202 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 WDR1O75083 606 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 SOD3P08294 240 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 PSG2P11465 335 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 P2RY1P47900 373 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 ERVK11-1P61568 191 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 EWSR1Q01844 656 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL27A1-202ENST00000451716 INO80CQ6PI98 192 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-202ENST00000451716 SAT2Q96F10 170 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-202ENST00000451716 NRIP2Q9BQI9 281 aa10.19□□□□□ -0.78
COL27A1-202ENST00000451716 RBM7Q9Y580 266 aaKnown RBP10.19□□□□□ -0.78
COL27A1-202ENST00000451716 ACACAQ13085 2346 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 IGSF23A1L1A6 192 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 AQP7O14520 342 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 PSPNO60542 156 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 CST7O76096 145 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 TMEM50AO95807 157 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 PGA5P0DJD9 388 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 IRF2P14316 349 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 UCP1P25874 307 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 RND3P61587 244 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF616Q08AN1 781 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 PRAMEF6Q5VXH4 476 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 OR8G2PQ6IF36 304 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF880Q6PDB4 577 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 H1FOOQ8IZA3 346 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-202ENST00000451716 OR2C3Q8N628 320 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 TMEM217Q8N7C4 229 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 OR1L6Q8NGR2 347 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 DKK4Q9UBT3 224 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 POLDIP2Q9Y2S7 368 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 FBXO7Q9Y3I1 522 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 PTPRBP23467 1997 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 C20orf202A1L168 122 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 IQCF6A8MYZ5 107 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 CECR9P0C854 216 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 F2RP25116 425 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 CD80P33681 288 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 SRPXP78539 464 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 ACSF3Q4G176 576 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-202ENST00000451716 NMSQ5H8A3 153 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 GPR157Q5UAW9 335 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 BTNL8Q6UX41 500 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 SARAFQ96BY9 339 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 MALSU1Q96EH3 234 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 USF3Q68DE3 2245 aa10.18□□□□□ -0.78
COL27A1-202ENST00000451716 NKX6-3A6NJ46 265 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 K7EP13 123 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 IGKV3-15P01624 115 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 UBE2G2P60604 165 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 TESK1Q15569 626 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 AKR1C8PQ5T2L2 129 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 IL34Q6ZMJ4 242 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF497Q6ZNH5 498 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 RPRMLQ8N4K4 120 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 OR10V1Q8NGI7 309 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 KCNS2Q9ULS6 477 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 ADGRG4Q8IZF6 3080 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 TRBV6-6A0A0A6YYG2 114 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 BORCS7-ASMTA0A0B4J1R7 106 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 PRR33A8MZF0 331 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 H3BP45 60 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 GGCTO75223 188 aaKnown RBP10.17□□□□□ -0.78
COL27A1-202ENST00000451716 TNFSF13O75888 250 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 DAOP14920 347 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 VDAC1P21796 283 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 ATP6V1FQ16864 119 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
COL27A1-202ENST00000451716 SMCO3A2RU48 225 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 ZNF705GA8MUZ8 300 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-202ENST00000451716 SH2D1BO14796 132 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 CHST1O43916 411 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 TIMM8AO60220 97 aaPredicted RBP10.16□□□□□ -0.78
COL27A1-202ENST00000451716 SERPINE2P07093 398 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 COX5AP20674 150 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 GZMHP20718 246 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 MIDNQ504T8 468 aa10.16□□□□□ -0.78
COL27A1-202ENST00000451716 Q6ZR03 302 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms