RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 OR5H14A6NHG9 310 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 LY6LH3BQJ8 138 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 BUB1B-PAK6H3BSN5 160 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 ARPC1BO15143 372 aaKnown RBP10.54□□□□□ -0.72
VPS33A-202ENST00000451053 PEX14O75381 377 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 SLC22A5O76082 557 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 RLN1P04808 185 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 FBP1P09467 338 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 SPNP16150 400 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 RAB7AP51149 207 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 FXYD4P59646 89 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 UBE2MP61081 183 aaKnown RBP10.54□□□□□ -0.72
VPS33A-202ENST00000451053 C11orf88Q6PI97 169 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 MARCH1Q8TCQ1 289 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 TOMM40LQ969M1 308 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
VPS33A-202ENST00000451053 ABHD14AQ9BUJ0 271 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 FXYD6Q9H0Q3 95 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 GHITMQ9H3K2 345 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 PRDM13Q9H4Q3 707 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 HILPDAQ9Y5L2 63 aa10.54□□□□□ -0.72
VPS33A-202ENST00000451053 MTORP42345 2549 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 ST8SIA5O15466 376 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 PRAF2O60831 178 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-202ENST00000451053 MECP2P51608 486 aaKnown RBP10.53□□□□□ -0.72
VPS33A-202ENST00000451053 DIAPH2-AS1Q14236 149 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 MSMO1Q15800 293 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 SSX2Q16385 188 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 ABCA11PQ4W5N1 156 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 TPTE2P1Q5T6R2 138 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 CMTM1Q8IZ96 169 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 SECTM1Q8WVN6 248 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 ZDHHC16Q969W1 377 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 MRGPRFQ96AM1 343 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 MALSU1Q96EH3 234 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 SLC5A7Q9GZV3 580 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 IFI27L2Q9H2X8 130 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 GPR132Q9UNW8 380 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 AMMECR1Q9Y4X0 333 aaPredicted RBP10.53□□□□□ -0.72
VPS33A-202ENST00000451053 NAV3Q8IVL0 2385 aa10.53□□□□□ -0.72
VPS33A-202ENST00000451053 SVEP1Q4LDE5 3571 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 LEUTXA8MZ59 168 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 Q6YL49 198 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 Q6ZNX1 250 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 TMED4Q7Z7H5 227 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 LDLRAD3Q86YD5 345 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 ODF3L1Q8IXM7 274 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 LYG1Q8N1E2 194 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 ZBTB34Q8NCN2 500 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF418Q8TF45 676 aaPredicted RBP10.52□□□□□ -0.73
VPS33A-202ENST00000451053 AKR1E2Q96JD6 320 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 RSRP1Q9BUV0 290 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 ALX4Q9H161 411 aaPredicted RBP10.52□□□□□ -0.73
VPS33A-202ENST00000451053 GPN1Q9HCN4 374 aaPredicted RBP10.52□□□□□ -0.73
VPS33A-202ENST00000451053 ESM1Q9NQ30 184 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 VSIG4Q9Y279 399 aa10.52□□□□□ -0.73
VPS33A-202ENST00000451053 GPR31O00270 319 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 HSD17B6O14756 317 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
VPS33A-202ENST00000451053 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 OR8U9P0C7N5 309 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 IL3RAP26951 378 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 CEACAM3P40198 252 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 REG1BP48304 166 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 BAMBIQ13145 260 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 RBMS3Q6XE24 437 aaKnown RBP10.51□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF645Q8N7E2 425 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 OR8U1Q8NH10 309 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 ST6GALNAC6Q969X2 333 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 RPEQ96AT9 228 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 ABHD14BQ96IU4 210 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 AGMATQ9BSE5 352 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 MEGF9Q9H1U4 602 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF221Q9UK13 617 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 RNF150Q9ULK6 438 aa10.51□□□□□ -0.73
VPS33A-202ENST00000451053 SAA2-SAA4A0A096LPE2 208 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 IGKV1D-13A0A0B4J2D9 117 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 A0A1W2PPI3 338 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 DNAJC9-AS1A6NH13 148 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 RNF212BA8MTL3 300 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 VENTXO95231 258 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 IL5P05113 134 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 SAA2P0DJI9 122 aaPredicted RBP10.5□□□□□ -0.73
VPS33A-202ENST00000451053 IGKV1-13P0DP09 117 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 GNRHRP30968 328 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 IER3P46695 156 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 GPR12P47775 334 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 ZNF137PP52743 207 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 RAB25P57735 213 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 HILS1P60008 231 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 RND3P61587 244 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 SRSF2Q01130 221 aaKnown RBP10.5□□□□□ -0.73
VPS33A-202ENST00000451053 LRRC75BQ2VPJ9 315 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
VPS33A-202ENST00000451053 TMEM128Q5BJH2 165 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms