RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 OR5AN1Q8NGI8 311 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 GPX8Q8TED1 209 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 GINS4Q9BRT9 223 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 SCPEP1Q9HB40 452 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 ZNF221Q9UK13 617 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 SIGLEC9Q9Y336 463 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 OR2W1Q9Y3N9 320 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
COL3A1-203ENST00000450867 MGAM2Q2M2H8 2515 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 SMIM31A0A1B0GVY4 71 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 H0YJW9 148 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 OR8U9P0C7N5 309 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 MC5RP33032 325 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 PRSS3P35030 304 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 GPR12P47775 334 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 FAM71E2Q8N5Q1 922 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 OR8U1Q8NH10 309 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 C5orf30Q96GV9 206 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 SLIRPQ9GZT3 109 aaKnown RBP11.41□□□□□ -0.58
COL3A1-203ENST00000450867 OR2D2Q9H210 308 aa11.41□□□□□ -0.58
COL3A1-203ENST00000450867 LIN7CQ9NUP9 197 aaKnown RBP11.41□□□□□ -0.58
COL3A1-203ENST00000450867 TET2Q6N021 2002 aaPredicted RBP11.41□□□□□ -0.58
COL3A1-203ENST00000450867 SULT1C2O00338 296 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 RBBP9O75884 186 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 ABCA11PQ4W5N1 156 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 Q8N9W7 124 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 OR5AP2Q8NGF4 316 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 NXF2Q9GZY0 626 aaKnown RBP11.4□□□□□ -0.58
COL3A1-203ENST00000450867 SDHAF2Q9NX18 166 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 RNF150Q9ULK6 438 aa11.4□□□□□ -0.58
COL3A1-203ENST00000450867 CMYA5Q8N3K9 4069 aa11.4□□□□□ -0.59
COL3A1-203ENST00000450867 NBEAL1Q6ZS30 2694 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 CTDSP2O14595 271 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 SLC22A5O76082 557 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 NDUFA3O95167 84 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 IGHG2P01859 326 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 VDAC2P45880 294 aaPredicted RBP11.39□□□□□ -0.59
COL3A1-203ENST00000450867 ARPC4P59998 168 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 ACTBP60709 375 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 TAGLNQ01995 201 aaKnown RBP11.39□□□□□ -0.59
COL3A1-203ENST00000450867 HNF4GQ14541 408 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 MSMO1Q15800 293 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 FAM131AQ6UXB0 335 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 KLHDC1Q8N7A1 406 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 NPBQ8NG41 125 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 C15orf40Q8WUR7 153 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 RNF5Q99942 180 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 IFT46Q9NQC8 304 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 NECAP2Q9NVZ3 263 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
COL3A1-203ENST00000450867 TNCP24821 2201 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 FAM25AB3EWG3 89 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 FAM25CB3EWG5 89 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 FAM25GB3EWG6 89 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 OR5H8P0DN80 308 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 NFYAP23511 347 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-203ENST00000450867 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-203ENST00000450867 CDK10Q15131 360 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 ZNF660Q6AZW8 331 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-203ENST00000450867 OVCH2Q7RTZ1 564 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 PDPNQ86YL7 162 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 LAX1Q8IWV1 398 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 GIMAP1Q8WWP7 306 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 DDB2Q92466 427 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 RABL2AQ9UBK7 228 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-203ENST00000450867 EXTL2Q9UBQ6 330 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 ZNF580Q9UK33 172 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 RABL2BQ9UNT1 228 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 FBN3Q75N90 2809 aa11.38□□□□□ -0.59
COL3A1-203ENST00000450867 IGKV1D-13A0A0B4J2D9 117 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 MEIS3P1A6NDR6 274 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 M0R1X1 148 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 IGKV1-13P0DP09 117 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
COL3A1-203ENST00000450867 THBS3P49746 956 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 F2RL1P55085 397 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 TAS2R46P59540 309 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
COL3A1-203ENST00000450867 EIF4EBP1Q13541 118 aaPredicted RBP11.37□□□□□ -0.59
COL3A1-203ENST00000450867 DYRK1AQ13627 763 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 TMEM95Q3KNT9 176 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 DHRS11Q6UWP2 260 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 GLDNQ6ZMI3 551 aaPredicted RBP11.37□□□□□ -0.59
COL3A1-203ENST00000450867 SNX29P2Q8IUI4 249 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 LYSMD2Q8IV50 215 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 RITA1Q96K30 269 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 RSL24D1Q9UHA3 163 aaKnown RBP11.37□□□□□ -0.59
COL3A1-203ENST00000450867 MRPS7Q9Y2R9 242 aaKnown RBP11.37□□□□□ -0.59
COL3A1-203ENST00000450867 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
COL3A1-203ENST00000450867 SH2D7A6NKC9 451 aaPredicted RBP11.36□□□□□ -0.59
COL3A1-203ENST00000450867 NCBP2LA6PVI3 153 aaKnown RBP11.36□□□□□ -0.59
COL3A1-203ENST00000450867 HAX1O00165 279 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 NBR2O15453 112 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 RGS5O15539 181 aa11.36□□□□□ -0.59
COL3A1-203ENST00000450867 SPDEFO95238 335 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms