RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZNF141Q15928 474 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 MRPL23Q16540 153 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 SRSF7Q16629 238 aaKnown RBP eCLIP1.91□□□□□ -2.1
USP53-202ENST00000450251 MST1LQ2TV78 715 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 CEACAM16Q2WEN9 425 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TMEM215Q68D42 235 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 UNQ5815/PRO19632Q6UWF5 114 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ASCL4Q6XD76 172 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SCGB1D4Q6XE38 83 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ADAMTSL5Q6ZMM2 481 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF788Q6ZQV5 615 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PDPNQ86YL7 162 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF645Q8N7E2 425 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZDHHC16Q969W1 377 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 GALMQ96C23 342 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 KLHDC7BQ96G42 594 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF414Q96IQ9 312 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OVOL2Q9BRP0 275 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 C5orf66Q9H5L9 145 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZMAT3Q9HA38 289 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 TNFRSF19Q9NS68 423 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SLC25A10Q9UBX3 287 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 MTCL1Q9Y4B5 1905 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 PDCD11Q14690 1871 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 IGLV3-16A0A075B6K0 115 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 A0A1W2PP11 408 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 B4DGG1 531 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 J3QRE1 110 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 HS3ST1O14792 307 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 IGHMP01871 453 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 NBEAP1P0C6P0 100 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF735P0CB33 412 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ERHP84090 104 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 PMP22Q01453 160 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 KLRD1Q13241 179 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 C4orf48Q5BLP8 95 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OTPQ5XKR4 325 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 METRNLQ641Q3 311 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 WDR82Q6UXN9 313 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 MOB3BQ86TA1 216 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 DMRTC2Q8IXT2 367 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 OR51G1Q8NGK1 321 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OR4A5Q8NH83 315 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OR1F12Q8NHA8 337 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 FAM174AQ8TBP5 190 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 FGF13Q92913 245 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 GNRHR2Q96P88 292 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OR8B2Q96RD0 313 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 FAM110AQ9BQ89 295 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SSBP3Q9BWW4 388 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 CACNG5Q9UF02 275 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 LAMTOR3Q9UHA4 124 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PLAGL1Q9UM63 463 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SCN8AQ9UQD0 1980 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TRAV5A0A0B4J249 113 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 IGHV1-24A0A0C4DH33 117 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 A0A1W2PPM0 123 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 NRG2O14511 850 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 SH2D1BO14796 132 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 CCL25O15444 150 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SLC25A5P05141 298 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 PI3P19957 117 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 HOXD9P28356 352 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 TGIF1Q15583 401 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 C9orf153Q5TBE3 101 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 GFI1BQ5VTD9 330 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 C16orf54Q6UWD8 224 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SHISA6Q6ZSJ9 500 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 DEFB125Q8N687 156 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF611Q8N823 705 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 OR8A1Q8NGG7 326 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OR10X1Q8NGY0 326 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 WNT2BQ93097 391 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 MRGPRFQ96AM1 343 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 RTBDNQ9BSG5 229 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 SH3BGRL3Q9H299 93 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF665Q9H7R5 613 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 IL36GQ9NZH8 169 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 THYN1Q9P016 225 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 WNT16Q9UBV4 365 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 NYNRINQ9P2P1 1898 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 TRGV10A0A0A0MS01 117 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TRAV8-2A0A0B4J237 113 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 M0QZ24 198 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TMPRSS2O15393 492 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 EDIL3O43854 480 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 CER1O95813 267 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 EML2O95834 649 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PPYP01298 95 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 IGLV3-27P01718 113 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 CRYAAP02489 173 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 GPX1P07203 203 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ACYP1P07311 99 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PRSS1P07477 247 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SP9P0CG40 484 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 GDF1P27539 372 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 KIR2DL1P43626 348 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms