RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 PGLYRP3Q96LB9 341 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 ABHD14AQ9BUJ0 271 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 LPAR2Q9HBW0 351 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 MED29Q9NX70 200 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 MDC1Q14676 2089 aaKnown RBP8.04□□□□□ -1.12
SMC6-207ENST00000448223 COX14Q96I36 57 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 WNT16Q9UBV4 365 aa8.04□□□□□ -1.12
SMC6-207ENST00000448223 PPIAL4EA0A075B759 164 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 TRAV8-6A0A0B4J262 113 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 TRAV39A0A0B4J263 110 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 A0A1B0GU03 582 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 METTL12A8MUP2 240 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PPIAL4FP0DN26 164 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 OR3A4PP47883 348 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 LGALS4P56470 323 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 SEC11AP67812 179 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PDCD1Q15116 288 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 C1orf194Q5T5A4 169 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 C16orf47Q6ZP98 133 aaPredicted RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 OR52E5Q8NH55 327 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 OR2V1Q8NHB1 315 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 C16orf52Q8NHV5 167 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 TMEM45BQ96B21 275 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 GDF15Q99988 308 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PPIAL4AQ9Y536 164 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 CNOT1A5YKK6 2376 aaKnown RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 ATXN7O15265 892 aaPredicted RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 LINC01565O15544 149 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 DNAL4O96015 105 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 FKBP2P26885 142 aaKnown RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 CKS2P33552 79 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 UCP3P55916 312 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PAX2Q02962 417 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 OCIAD2Q56VL3 154 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 DCAF10Q5QP82 559 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 OR4X1Q8NH49 305 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 KIR2DS5A0A0G2JLQ3 304 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 A0A0G2JNG1 304 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 A0A1B0GWJ7 208 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 A6NCN8 305 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 KIR2DS3K7RE56 304 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 WNT5AP41221 380 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 ATP5IP56385 69 aaPredicted RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 KIR2DS5Q14953 304 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 GAGE13Q4V321 117 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PYY3Q5JQD4 70 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PSMG4Q5JS54 123 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 APOBEC3DQ96AK3 386 aaPredicted RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 VOPP1Q96AW1 172 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 ZNF414Q96IQ9 312 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 PRSS27Q9BQR3 290 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 MPDZO75970 2070 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 DOCK8Q8NF50 2099 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 NOTCH4Q99466 2003 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 TRAV9-2A0A087WT02 112 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 SPINK8P0C7L1 97 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 LGALS3P17931 250 aaKnown RBP8.03□□□□□ -1.12
SMC6-207ENST00000448223 TDGF1P3P51864 188 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 ZNF117Q03924 483 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 MUCL1Q96DR8 90 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 ANKRD10Q9NXR5 420 aa8.03□□□□□ -1.12
SMC6-207ENST00000448223 TMEM30CPA0ZSE6 113 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 TMEM50AO95807 157 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 CRIPAKQ8N1N5 446 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 PNKDQ8N490 385 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 OR4C13Q8NGP0 309 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 NRN1Q9NPD7 142 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 CEACAM1P13688 526 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 NANOS3P60323 173 aaKnown RBP8.02□□□□□ -1.13
SMC6-207ENST00000448223 LRRC29Q8WV35 223 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 LINC00470Q9BZP3 86 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 RBKSQ9H477 322 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 LYRM4Q9HD34 91 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 KBTBD11-OT1A0A1B0GTJ5 212 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 LRRC30A6NM36 301 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 SOCS1O15524 211 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 NGFRP08138 427 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 MC5RP33032 325 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 TMEM50BP56557 158 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
SMC6-207ENST00000448223 FAM71F2Q6NXP2 309 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 GBGT1Q8N5D6 347 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 PTX4Q96A99 478 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 LOXL4Q96JB6 756 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 SOSTQ9BQB4 213 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 NPDC1Q9NQX5 325 aaPredicted RBP8.02□□□□□ -1.13
SMC6-207ENST00000448223 BOKQ9UMX3 212 aaPredicted RBP8.02□□□□□ -1.13
SMC6-207ENST00000448223 TCF20Q9UGU0 1960 aaKnown RBP8.02□□□□□ -1.13
SMC6-207ENST00000448223 IGHV3-64DA0A0J9YX35 117 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 VENTXO95231 258 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 FREM3P0C091 2139 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 ASAH2BP0C7U1 165 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 BCORP1Q8N888 145 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 OR1B1Q8NGR6 318 aa8.02□□□□□ -1.13
SMC6-207ENST00000448223 OR6X1Q8NH79 312 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms