RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 IGKV1-16P04430 117 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 CD7P09564 240 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 AADACP22760 399 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 DYRK1AQ13627 763 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 TATDN3Q17R31 274 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 CD300EQ496F6 205 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-208ENST00000443046 CDH26Q8IXH8 852 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 RHOXF1Q8NHV9 184 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 DDB2Q92466 427 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 ST6GALNAC5Q9BVH7 336 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 TINAGL1Q9GZM7 467 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-208ENST00000443046 PARP12Q9H0J9 701 aaKnown RBP10.85□□□□□ -0.67
HMGN1-208ENST00000443046 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 STEAP1Q9UHE8 339 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 PKHD1P08F94 4074 aa10.85□□□□□ -0.67
HMGN1-208ENST00000443046 SAC3D1A6NKF1 404 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 H7C2Y5 167 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 AIREO43918 545 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 RBMXL2O75526 392 aaKnown RBP10.84□□□□□ -0.67
HMGN1-208ENST00000443046 FSTP19883 344 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
HMGN1-208ENST00000443046 ZNF880Q6PDB4 577 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 OR13C5Q8NGS8 318 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 SMIM19Q96E16 107 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 ABHD14BQ96IU4 210 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 TMEM68Q96MH6 324 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 SRD5A3Q9H8P0 318 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 SLC2A8Q9NY64 477 aa10.84□□□□□ -0.67
HMGN1-208ENST00000443046 ABCA13Q86UQ4 5058 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 TRBV5-7A0A0A0MS05 114 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 BAG2O95816 211 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 ZIK1Q3SY52 487 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-208ENST00000443046 RPP25LQ8N5L8 163 aaKnown RBP10.83□□□□□ -0.68
HMGN1-208ENST00000443046 JAGN1Q8N5M9 183 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 BVESQ8NE79 360 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 Q96MT0 163 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
HMGN1-208ENST00000443046 SULT4A1Q9BR01 284 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 OVOL2Q9BRP0 275 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 FGF20Q9NP95 211 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-208ENST00000443046 ZC4H2Q9NQZ6 224 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 PEMTQ9UBM1 199 aa10.83□□□□□ -0.68
HMGN1-208ENST00000443046 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 EI24O14681 340 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 CRTAPO75718 401 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-208ENST00000443046 NAPSAO96009 420 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 CRYGBP07316 175 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 CAPGP40121 348 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 ETV1P50549 477 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 DEFA5Q01523 94 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 PJVKQ0ZLH3 352 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 RPEL1Q2QD12 228 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 DEFB114Q30KQ6 69 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 Q499Y3 187 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 AWAT2Q6E213 333 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 SVOPQ8N4V2 548 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 ZNF383Q8NA42 475 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 IL1F10Q8WWZ1 152 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 SNAPC3Q92966 411 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 BABAM2Q9NXR7 383 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 ABRACLQ9P1F3 81 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 CKLFQ9UBR5 152 aa10.82□□□□□ -0.68
HMGN1-208ENST00000443046 RPL36Q9Y3U8 105 aaKnown RBP10.82□□□□□ -0.68
HMGN1-208ENST00000443046 NUPR2A6NF83 97 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 H3BNX3 289 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 LALBAP00709 142 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 CPEP16870 476 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 LINC00205P59089 165 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 RPS16P62249 146 aaKnown RBP10.81□□□□□ -0.68
HMGN1-208ENST00000443046 YIF1BQ5BJH7 314 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 PDPNQ86YL7 162 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 DRAXINQ8NBI3 349 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-208ENST00000443046 APH1BQ8WW43 257 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 FAAP24Q9BTP7 215 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 C11orf54Q9H0W9 315 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-208ENST00000443046 ORC6Q9Y5N6 252 aa10.81□□□□□ -0.68
HMGN1-208ENST00000443046 FAT2Q9NYQ8 4349 aa10.8□□□□□ -0.68
HMGN1-208ENST00000443046 BMPR1BO00238 502 aa10.8□□□□□ -0.68
HMGN1-208ENST00000443046 EWSR1Q01844 656 aaKnown RBP eCLIP10.8□□□□□ -0.68
HMGN1-208ENST00000443046 MRGPRG-AS1Q2M3A8 158 aa10.8□□□□□ -0.68
HMGN1-208ENST00000443046 CEMP1Q6PRD7 247 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-208ENST00000443046 FAM46BQ96A09 425 aa10.8□□□□□ -0.68
HMGN1-208ENST00000443046 PTX4Q96A99 478 aa10.8□□□□□ -0.68
HMGN1-208ENST00000443046 PGLYRP3Q96LB9 341 aa10.8□□□□□ -0.68
HMGN1-208ENST00000443046 CXorf65A6NEN9 183 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 KIR2DS2P43631 304 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 LGALS7P47929 136 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 TNFRSF9Q07011 255 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 C1orf146Q5VVC0 180 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 TMPRSS11AQ6ZMR5 421 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 WFDC3Q8IUB2 231 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 ZNF485Q8NCK3 441 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 ADAD2Q8NCV1 583 aaKnown RBP10.79□□□□□ -0.68
HMGN1-208ENST00000443046 UQCC2Q9BRT2 126 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 GHRLQ9UBU3 117 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms