RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 MRPL20Q9BYC9 149 aaKnown RBP6.08□□□□□ -1.44
CD44-211ENST00000442151 ZNF581Q9P0T4 197 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 RAB22AQ9UL26 194 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 GAB2Q9UQC2 676 aa6.08□□□□□ -1.44
CD44-211ENST00000442151 FOXA2Q9Y261 457 aaPredicted RBP6.08□□□□□ -1.44
CD44-211ENST00000442151 A0A0G2JLM5 398 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 MAGEA13PA6NCF6 341 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 METTL21EPA6NDL7 271 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 A6NJY4 79 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 LINC01548A6NM66 108 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 TMEM14DPA8MWL7 114 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 ZNF736B4DX44 427 aaPredicted RBP6.07□□□□□ -1.44
CD44-211ENST00000442151 OVOL1O14753 267 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 DIRAS3O95661 229 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 NAPSAO96009 420 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 IGLV1-40P01703 118 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 HSPB1P04792 205 aaKnown RBP6.07□□□□□ -1.44
CD44-211ENST00000442151 CD3GP09693 182 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 CPEP16870 476 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 PPIFP30405 207 aaKnown RBP6.07□□□□□ -1.44
CD44-211ENST00000442151 LGALS7P47929 136 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 CRIP2P52943 208 aaPredicted RBP6.07□□□□□ -1.44
CD44-211ENST00000442151 MLLT11Q13015 90 aaPredicted RBP6.07□□□□□ -1.44
CD44-211ENST00000442151 ZNF260Q3ZCT1 412 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 ZNF562Q6V9R5 426 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 C6orf201Q7Z4U5 140 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 PDPNQ86YL7 162 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 FAM89BQ8N5H3 189 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 MINDY2Q8NBR6 621 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 PTX4Q96A99 478 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 OR4C12Q96R67 309 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 HSPB9Q9BQS6 159 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 SULT4A1Q9BR01 284 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 ANKRD60Q9BZ19 345 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 CCDC90BQ9GZT6 254 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 C12orf4Q9NQ89 552 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 ZNF256Q9Y2P7 627 aaPredicted RBP6.07□□□□□ -1.44
CD44-211ENST00000442151 WSB1Q9Y6I7 421 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 V9GY05 133 aa6.07□□□□□ -1.44
CD44-211ENST00000442151 SAA2-SAA4A0A096LPE2 208 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 TRDCB7Z8K6 153 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 LINC01619G3V211 115 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 H3BUA1 57 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 DENRO43583 198 aaKnown RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 LY86O95711 162 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 TFAP2AP05549 437 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 HSMCR30P0CW71 290 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 SAA2P0DJI9 122 aaPredicted RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 SLC2A2P11168 524 aaPredicted RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 TALDO1P37837 337 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 RPS16P62249 146 aaKnown RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 HLA-DRB3P79483 266 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 FHL3Q13643 280 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 FAM209BQ5JX69 171 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 C18orf65Q6ZTR6 163 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 PPP1R27Q86WC6 154 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 ODF3L1Q8IXM7 274 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 OR5AN1Q8NGI8 311 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 OR4A4PQ8NGN8 299 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 MYOZ3Q8TDC0 251 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 ADTRPQ96IZ2 230 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 RBM7Q9Y580 266 aaKnown RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 U3KQK5 164 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 IGHV7-81A0A0B4J1V7 117 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 C13orf42A0A1B0GVH6 325 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 A0A1W2PN81 502 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 I3L521 148 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 ATP6V0E1O15342 81 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 CREBL2O60519 120 aaPredicted RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 MRPS14O60783 128 aaKnown RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 SLC22A5O76082 557 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 GNAO1P09471 354 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 OR8U9P0C7N5 309 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 ZP3P21754 424 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 AADACP22760 399 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 MYL9P24844 172 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 CHRNA7P36544 502 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 PITPNAQ00169 270 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 GNMTQ14749 295 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
CD44-211ENST00000442151 ACTBL2Q562R1 376 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 PRSS48Q7RTY5 328 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 LPAR5Q9H1C0 372 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 DUSP21Q9H596 190 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 ZMAT4Q9H898 229 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 RANGRFQ9HD47 186 aaPredicted RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 Q9N2K0 584 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 METTL1Q9UBP6 276 aaKnown RBP6.06□□□□□ -1.44
CD44-211ENST00000442151 AK3Q9UIJ7 227 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 NUBP2Q9Y5Y2 271 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 SMAD5-AS1Q9Y6J3 95 aa6.06□□□□□ -1.44
CD44-211ENST00000442151 H0YJW9 148 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 SCGNO76038 276 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 CNIH1O95406 144 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 LGALS1P09382 135 aaKnown RBP6.05□□□□□ -1.44
CD44-211ENST00000442151 CTXN2P0C2S0 81 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 CT45A6P0DMU7 189 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 CT45A5P0DMU8 189 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 CT45A7P0DMV0 189 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 RAB6AP20340 208 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms