RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 S100A6P06703 90 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 PPIAL4GP0DN37 164 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 ECI1P42126 302 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 F2RL1P55085 397 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 RPL31P62899 125 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 RNF212Q495C1 297 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 SUCNR1Q9BXA5 334 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 TAF9BQ9HBM6 251 aa6.16□□□□□ -1.42
CDC42BPA-208ENST00000442054 LOC400499M0QZD8 3231 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 hCG_38984A0A1B0GV85 526 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 C13orf42A0A1B0GVH6 325 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 WNT2P09544 360 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 IL2RGP31785 369 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 DVL1P1P54792 670 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 RIPPLY3P57055 190 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 PLGLAQ15195 96 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM189A2Q15884 450 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 SPSB3Q6PJ21 355 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 FBXW12Q6X9E4 464 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 OR5A2Q8NGI9 324 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 LHX4Q969G2 390 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 SLAMF9Q96A28 289 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 RBM14Q96PK6 669 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 CMSS1Q9BQ75 279 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 URM1Q9BTM9 101 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 TRAPPC2LQ9UL33 140 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 TRGV10A0A0A0MS01 117 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 TRAV40A0A0B4J280 105 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 C5orf51A6NDU8 294 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 EIF3GO75821 320 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 TOX4O94842 621 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 SNAPINO95295 136 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 SEC11BP0C7V7 166 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 SELLP14151 372 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 MBNL2Q5VZF2 373 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF565Q8N9K5 539 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 TMEM204Q9BSN7 226 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 EHFQ9NZC4 300 aa6.15□□□□□ -1.42
CDC42BPA-208ENST00000442054 A0A1B0GW55 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 hADV38S2A0JD32 116 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM210A6NLX4 147 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 IFITM10A6NMD0 228 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF705EA8MWA4 302 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4L2P0CJ85 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4L3P0CJ86 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4L4P0CJ87 422 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4L5P0CJ88 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4L6P0CJ89 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4L7P0CJ90 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 EPHA1P21709 976 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 BLVRBP30043 206 aaPredicted RBP6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 S100A12P80511 92 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR51T1Q8NGJ9 327 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR52M1Q8NGK5 317 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 MOB3AQ96BX8 217 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 ST6GALNAC5Q9BVH7 336 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 PATZ1Q9HBE1 687 aaKnown RBP6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 DUX4Q9UBX2 424 aa6.15□□□□□ -1.43
CDC42BPA-208ENST00000442054 IQCF6A8MYZ5 107 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 F8W036 122 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 LIPFP07098 398 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 AMY2BP19961 511 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 BLOC1S1P78537 153 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 LHFPL2Q6ZUX7 228 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 CIARTQ8N365 385 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 C15orf54Q8N8G6 183 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 IL1F10Q8WWZ1 152 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF2Q9BSG1 426 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 NAA60Q9H7X0 242 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 COL12A1Q99715 3063 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 J3QT63 122 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 SPRY1O43609 319 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM50AO95807 157 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 IFNA6P05013 189 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 SFTPBP07988 381 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 P2RY1P47900 373 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 HERPUD1Q15011 391 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM120AOSQ5T036 256 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 Q8IYB0 196 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 SFT2D1Q8WV19 159 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM56Q96MV1 263 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 CLCC1Q96S66 551 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAAP24Q9BTP7 215 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 C1QTNF5Q9BXJ0 243 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM56-RWDD3S4R434 201 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 TUSC2O75896 110 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 NAPSAO96009 420 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGLV2-14P01704 120 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 CPT2P23786 658 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 FHITP49789 147 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 LOXL1Q08397 574 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 C1QL4Q86Z23 238 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM58AQ8N1B3 248 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR5D13Q8NGL4 314 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 SPSB1Q96BD6 273 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF488Q96MN9 340 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 SCGB3A2Q96PL1 93 aa6.14□□□□□ -1.43
CDC42BPA-208ENST00000442054 SH3BGRL3Q9H299 93 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms