RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 CT45A7P0DMV0 189 aa14.33□□□□□ -0.12
CPSF4-205ENST00000440514 ELK1P19419 428 aa14.33□□□□□ -0.12
CPSF4-205ENST00000440514 C11orf44Q8N8P7 122 aa14.33□□□□□ -0.12
CPSF4-205ENST00000440514 ANXA10Q9UJ72 324 aa14.33□□□□□ -0.12
CPSF4-205ENST00000440514 ZNF221Q9UK13 617 aa14.33□□□□□ -0.12
CPSF4-205ENST00000440514 NCBP2LA6PVI3 153 aaKnown RBP14.32□□□□□ -0.12
CPSF4-205ENST00000440514 FGF16O43320 207 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 CNIH2Q6PI25 160 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 HOGA1Q86XE5 327 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 Q8N9W7 124 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 DRAXINQ8NBI3 349 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-205ENST00000440514 BEST4Q8NFU0 473 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 C5orf30Q96GV9 206 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 PLSCR3Q9NRY6 295 aa14.32□□□□□ -0.12
CPSF4-205ENST00000440514 CCDC59Q9P031 241 aaKnown RBP14.32□□□□□ -0.12
CPSF4-205ENST00000440514 CCDC160A6NGH7 325 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 H3BMQ9 156 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 M0R1X1 148 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 PEX14O75381 377 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 NFYAP23511 347 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-205ENST00000440514 CNTFRP26992 372 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 F2RL1P55085 397 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 LINC00205P59089 165 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 ARPC4P59998 168 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 SNAPC3Q92966 411 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 ISOC1Q96CN7 298 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 RITA1Q96K30 269 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 WNT10AQ9GZT5 417 aa14.31□□□□□ -0.12
CPSF4-205ENST00000440514 RBM7Q9Y580 266 aaKnown RBP14.31□□□□□ -0.12
CPSF4-205ENST00000440514 FAM25AB3EWG3 89 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 FAM25CB3EWG5 89 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 FAM25GB3EWG6 89 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 H0YJW9 148 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 J3QRK9 145 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 SLC22A5O76082 557 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 PRSS3P35030 304 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 ACTBP60709 375 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 MMDQ15546 238 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 ZNF383Q8NA42 475 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-205ENST00000440514 SCPEP1Q9HB40 452 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 IFT46Q9NQC8 304 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 SDHAF2Q9NX18 166 aa14.3□□□□□ -0.12
CPSF4-205ENST00000440514 MRPS7Q9Y2R9 242 aaKnown RBP14.3□□□□□ -0.12
CPSF4-205ENST00000440514 OR5H14A6NHG9 310 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 HLA-DQB1P01920 261 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 SNX29P2Q8IUI4 249 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 FAM71E2Q8N5Q1 922 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 OR8H1Q8NGG4 311 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 DYNC2LI1Q8TCX1 351 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 WIPF2Q8TF74 440 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-205ENST00000440514 LIN7CQ9NUP9 197 aaKnown RBP14.29□□□□□ -0.12
CPSF4-205ENST00000440514 RSL24D1Q9UHA3 163 aaKnown RBP14.29□□□□□ -0.12
CPSF4-205ENST00000440514 WASHC3Q9Y3C0 194 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 CEPT1Q9Y6K0 416 aa14.29□□□□□ -0.12
CPSF4-205ENST00000440514 IGKV1D-13A0A0B4J2D9 117 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 H7C2Y5 167 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 SULT1C2O00338 296 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 RGS5O15539 181 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 IGKV1-13P0DP09 117 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 CD28P10747 220 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 TAGLNQ01995 201 aaKnown RBP14.28□□□□□ -0.12
CPSF4-205ENST00000440514 SLC35E3Q7Z769 313 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 OR5AN1Q8NGI8 311 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 SGMS2Q8NHU3 365 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 RASL11BQ9BPW5 248 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 MIXL1Q9H2W2 232 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 ANAPC10Q9UM13 185 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 OR2W1Q9Y3N9 320 aa14.28□□□□□ -0.12
CPSF4-205ENST00000440514 NBR2O15453 112 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 FBXO24O75426 580 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 MC5RP33032 325 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 LUMP51884 338 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-205ENST00000440514 C10orf99Q6UWK7 81 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 LAX1Q8IWV1 398 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 NOL4LQ96MY1 436 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-205ENST00000440514 HSPB9Q9BQS6 159 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 NECAP2Q9NVZ3 263 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 EXTL2Q9UBQ6 330 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 LINC00527Q9UJ94 153 aa14.27□□□□□ -0.13
CPSF4-205ENST00000440514 TET2Q6N021 2002 aaPredicted RBP14.27□□□□□ -0.13
CPSF4-205ENST00000440514 LINC01548A6NM66 108 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 TUSC2O75896 110 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 IGHG2P01859 326 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 APOA2P02652 100 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 IGKV1-16P04430 117 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 AADACP22760 399 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 MRPS10P82664 201 aaKnown RBP14.26□□□□□ -0.13
CPSF4-205ENST00000440514 RNASE12Q5GAN4 147 aaKnown RBP14.26□□□□□ -0.13
CPSF4-205ENST00000440514 OR5AP2Q8NGF4 316 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 SLC35D1Q9NTN3 355 aa14.26□□□□□ -0.13
CPSF4-205ENST00000440514 CTDSP2O14595 271 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 FCGR2CP31995 323 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 TAS2R46P59540 309 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 CDK10Q15131 360 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 PRR31Q5SQ13 230 aa14.25□□□□□ -0.13
CPSF4-205ENST00000440514 CENPVQ7Z7K6 275 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms