RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 BLNKQ8WV28 456 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 LYZL4Q96KX0 146 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 SH2D2AQ9NP31 389 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 SLC2A8Q9NY64 477 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 IL19Q9UHD0 177 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 DUXBA0A1W2PPF3 345 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 ERVFC1-1P60608 527 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 FABP9Q0Z7S8 132 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 MMDQ15546 238 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 FAM74A3Q4VXF1 159 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 ETFRF1Q6IPR1 90 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 WBP1Q96G27 269 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 GFI1Q99684 422 aa10.49□□□□□ -0.73
TCOF1-205ENST00000439160 CDK2AP1O14519 115 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 ARG1P05089 322 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 S100A8P05109 93 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 FAM78BQ5VT40 261 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF439Q8NDP4 499 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 OR52M1Q8NGK5 317 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 RSRP1Q9BUV0 290 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 BARX1Q9HBU1 254 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-205ENST00000439160 TNFRSF19Q9NS68 423 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 SLC45A2Q9UMX9 530 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 KCNMB2Q9Y691 235 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 ACACBO00763 2458 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 HSBP1L1C9JCN9 74 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 CLN5O75503 358 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 HPRT1P00492 218 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 MELTFP08582 738 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF273Q14593 569 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 DEDDO75618 318 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 H3F3AP84243 136 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 MRGPRGQ86SM5 289 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 IGHV3-21A0A0B4J1V1 117 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 IGHV2OR16-5A0A0B4J2B6 119 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 H0YL77 283 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 GPR146Q96CH1 333 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 TM2D1Q9BX74 207 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 HILPDAQ9Y5L2 63 aa10.48□□□□□ -0.73
TCOF1-205ENST00000439160 LYZP61626 148 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 ARL16Q0P5N6 197 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 KLRB1Q12918 225 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 TMEM241Q24JQ0 296 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 THYN1Q9P016 225 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 SEC11BP0C7V7 166 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 CD40P25942 277 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 BRS3P32247 399 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 GUCA2BQ16661 112 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF645Q8N7E2 425 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 OR1L8Q8NGR8 309 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 ZCCHC14Q8WYQ9 949 aaKnown RBP10.47□□□□□ -0.73
TCOF1-205ENST00000439160 FOXD3Q9UJU5 478 aaPredicted RBP10.47□□□□□ -0.73
TCOF1-205ENST00000439160 CENPFP49454 3210 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 ZNF785A8K8V0 405 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 FAM57AQ8TBR7 257 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 RSG1Q9BU20 258 aa10.47□□□□□ -0.73
TCOF1-205ENST00000439160 H0Y8G0 127 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 F2RL2O00254 374 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 B2MP61769 119 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 TP53RKQ96S44 253 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 LY6G6EA0A0G2JKS1 128 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 G3V3Q6 166 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 SPINK4O60575 86 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 ZP1P60852 638 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 UBE2L3P68036 154 aaKnown RBP10.46□□□□□ -0.73
TCOF1-205ENST00000439160 C2orf68Q2NKX9 166 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 MUC15Q8N387 334 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 GCSAMQ8N6F7 178 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 OR4P4Q8NGL7 312 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 RAXQ9Y2V3 346 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 U3KQA8 63 aa10.46□□□□□ -0.73
TCOF1-205ENST00000439160 CRYBA1P05813 215 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 FOXF2Q12947 444 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 ZNF66Q6ZN08 573 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 PAQR4Q8N4S7 273 aaPredicted RBP10.46□□□□□ -0.74
TCOF1-205ENST00000439160 MEGF10Q96KG7 1140 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 SOSTQ9BQB4 213 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 NOTCH2Q04721 2471 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 OR2A4O95047 310 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 SLC25A5P05141 298 aaKnown RBP10.46□□□□□ -0.74
TCOF1-205ENST00000439160 GFRA1P56159 465 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 RNF212Q495C1 297 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 SELENOHQ8IZQ5 122 aaKnown RBP10.46□□□□□ -0.74
TCOF1-205ENST00000439160 DRAM1Q8N682 238 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 AP1S3Q96PC3 154 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 OR2A7Q96R45 310 aa10.46□□□□□ -0.74
TCOF1-205ENST00000439160 WISP1O95388 367 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 MEOX2P50222 304 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 SPNS3Q6ZMD2 512 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 STPG2Q8N412 459 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 C1orf162Q8NEQ5 155 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-205ENST00000439160 SLC25A28Q96A46 364 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 NDFIP1Q9BT67 221 aa10.45□□□□□ -0.74
TCOF1-205ENST00000439160 PROB1E7EW31 1015 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms