RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DNAJC9Q8WXX5 260 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 UFD1Q92890 307 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CPNE4Q96A23 557 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPEQ96AT9 228 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 RNF170Q96K19 258 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 DNAJC1Q96KC8 554 aaKnown RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PGLYRP4Q96LB8 373 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR52B2Q96RD2 323 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF382Q96SR6 550 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 KCTD14Q9BQ13 255 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF251Q9BRH9 671 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 THTPAQ9BU02 230 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 OSBPL10Q9BXB5 764 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRRG3Q9BZD7 231 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ACTR3CQ9C0K3 210 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 WDR55Q9H6Y2 383 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRIM45Q9H8W5 580 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 FOLH1BQ9HBA9 442 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 VCX3AQ9NNX9 186 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ARMC1Q9NVT9 282 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 GID8Q9NWU2 228 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 CLN6Q9NWW5 311 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 USE1Q9NZ43 259 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 MAT2BQ9NZL9 334 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 VPREB3Q9UKI3 123 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRELID1Q9Y255 219 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 DNAJC15Q9Y5T4 150 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 TSSC4Q9Y5U2 329 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 ARL5AQ9Y689 179 aa1.38□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A0A6YYD5 115 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 GLYATL1P3A0A0U1RQE8 302 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRSS37A4D1T9 235 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSMB11A5LHX3 300 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5B21A6NL26 309 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 FXYD1O00168 92 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 GPR171O14626 319 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 GOSR2O14653 212 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 HSD17B6O14756 317 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 GATCO43716 136 aaKnown RBP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF780AO75290 641 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 EEDO75530 441 aaKnown RBP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 STK16O75716 305 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 SRP72O76094 671 aaKnown RBP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 NSA2O95478 260 aaKnown RBP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 IL6P05231 212 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 C8GP07360 202 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 ANXA5P08758 320 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CTXN2P0C2S0 81 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CT45A6P0DMU7 189 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CT45A5P0DMU8 189 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CT45A7P0DMV0 189 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 COX7A1P24310 79 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 HTR2CP28335 458 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 SHMT2P34897 504 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 HSPA13P48723 471 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 SPINT3P49223 89 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 DLX1P56177 255 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 TAS2R19P59542 299 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 DSTNP60981 165 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSME3P61289 254 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 RHOAP61586 193 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 SELENOTP62341 195 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 POLR2GP62487 172 aaKnown RBP eCLIP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 BNIP2Q12982 314 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRAM2Q15035 370 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 IMPG1Q17R60 797 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 TTLL9Q3SXZ7 439 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 AKIRIN2Q53H80 203 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CT45A1Q5HYN5 189 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 RBM48Q5RL73 367 aaKnown RBP1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 TIMM23BQ5SRD1 257 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 C1orf100Q5SVJ3 147 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 C6orf183Q5T699 404 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR52E8Q6IFG1 317 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 LCN8Q6JVE9 175 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 SSX7Q7RTT5 188 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 GLT6D1Q7Z4J2 308 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 ARPINQ7Z6K5 226 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CAMK2N1Q7Z7J9 78 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OOSP2Q86WS3 158 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 RIMKLAQ8IXN7 391 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 DEFB107AQ8IZN7 70 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 RDH10Q8IZV5 341 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRAM1L1Q8N609 369 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 NATD1Q8N6N6 113 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CCNYL1Q8N7R7 359 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 NKAPP1Q8N9T2 125 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 GPR26Q8NDV2 337 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 NOXO1Q8NFA2 376 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR8J3Q8NGG0 315 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR13C4Q8NGS5 318 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR6K2Q8NGY2 324 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR2L8Q8NGY9 312 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR56B4Q8NH76 319 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR6X1Q8NH79 312 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CT45A3Q8NHU0 189 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 ENKURQ8TC29 256 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 CD200R1Q8TD46 325 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 EEF1AKMT1Q8WVE0 214 aa1.37□□□□□ -2.19
HMGB1P18-201ENST00000438801 TWIST2Q8WVJ9 160 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms