RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 FXYD3Q14802 87 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 C4orf17Q53FE4 359 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 TRBV5-7A0A0A0MS05 114 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 A0A0G2JLM5 398 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 NHLH1Q02575 133 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 TMEM78Q5T7P6 136 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 POC1AQ8NBT0 407 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 NPFFR1Q9GZQ6 430 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 WSB1Q9Y6I7 421 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 LINC00271P0C7V0 271 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 GLIPR1P48060 266 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 SYT8Q8NBV8 401 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 C1QTNF5Q9BXJ0 243 aa13.34□□□□□ -0.27
NEDD4-202ENST00000435532 QTRT1Q9BXR0 403 aaKnown RBP13.34□□□□□ -0.27
NEDD4-202ENST00000435532 TDRD6O60522 2096 aaKnown RBP13.34□□□□□ -0.27
NEDD4-202ENST00000435532 NBL1P41271 181 aa13.33□□□□□ -0.27
NEDD4-202ENST00000435532 ZNF738Q8NE65 137 aa13.33□□□□□ -0.27
NEDD4-202ENST00000435532 PHYHIPLQ96FC7 376 aa13.33□□□□□ -0.27
NEDD4-202ENST00000435532 TUBA4BQ9H853 241 aa13.33□□□□□ -0.27
NEDD4-202ENST00000435532 ERVH48-1M5A8F1 160 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 ZG16O60844 167 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 P01737 135 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 RIGQ13278 110 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 RHOVQ96L33 236 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 DEPPQ9NTK1 212 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 ICMTO60725 284 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 SPNP16150 400 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 TMEM56-RWDD3S4R434 201 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.28
NEDD4-202ENST00000435532 PAXXQ9BUH6 204 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 S1PR2O95136 353 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 C19orf35Q6ZS72 473 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 SSC4DQ8WTU2 575 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 MS4A10Q96PG2 267 aa13.33□□□□□ -0.28
NEDD4-202ENST00000435532 M0QZK8 103 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 RAMP1O60894 148 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 ZNF735P0CB33 412 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 TSPOP30536 169 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 Q96M66 194 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 FAM103A1Q9BTL3 118 aaKnown RBP13.32□□□□□ -0.28
NEDD4-202ENST00000435532 HMSDA8MTL9 139 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 HCP5Q6MZN7 132 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 MARVELD1Q9BSK0 173 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 CD1BP29016 333 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 ZIC4Q8N9L1 334 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 TOLLIPQ9H0E2 274 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 TMEM140Q9NV12 185 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 MPDU1O75352 247 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 RD3LP0DJH9 198 aa13.32□□□□□ -0.28
NEDD4-202ENST00000435532 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.32□□□□□ -0.28
NEDD4-202ENST00000435532 ZNF430Q9H8G1 570 aaPredicted RBP13.32□□□□□ -0.28
NEDD4-202ENST00000435532 ADAD2Q8NCV1 583 aaKnown RBP13.31□□□□□ -0.28
NEDD4-202ENST00000435532 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
NEDD4-202ENST00000435532 K7ENP7 123 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 PRR13Q9NZ81 148 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 HSPE1P61604 102 aaKnown RBP13.31□□□□□ -0.28
NEDD4-202ENST00000435532 PSG9Q00887 426 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 KIAA1324LA8MWY0 1029 aaPredicted RBP13.31□□□□□ -0.28
NEDD4-202ENST00000435532 TRGV3P03979 118 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 COL8A1P27658 744 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 ZNF137PP52743 207 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 PDE6DO43924 150 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 HPXP02790 462 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 SNRPD3P62318 126 aaKnown RBP13.31□□□□□ -0.28
NEDD4-202ENST00000435532 WFDC6Q9BQY6 131 aa13.31□□□□□ -0.28
NEDD4-202ENST00000435532 SIRT4Q9Y6E7 314 aaPredicted RBP13.31□□□□□ -0.28
NEDD4-202ENST00000435532 C17orf51A8MQB3 221 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 DEDDO75618 318 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 THY1P04216 161 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 SFTA3P0C7M3 94 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 FCER1GP30273 86 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 FGF8P55075 233 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-202ENST00000435532 UBE2V2Q15819 145 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 DPPA3Q6W0C5 159 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 RCC2Q9P258 522 aaKnown RBP13.3□□□□□ -0.28
NEDD4-202ENST00000435532 SEMA5BQ9P283 1151 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 MGAMO43451 1857 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 PGLYRP1O75594 196 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-202ENST00000435532 KIR2DL2P43627 348 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-202ENST00000435532 SLC35E3Q7Z769 313 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 PRSS3P2Q8NHM4 247 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 AICDAQ9GZX7 198 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 C11orf94C9JXX5 98 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 MGPP08493 103 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 VDAC2P45880 294 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-202ENST00000435532 ATP5IP56385 69 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-202ENST00000435532 PRSS22Q9GZN4 317 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 TMEM222Q9H0R3 208 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 TRAPPC1Q9Y5R8 145 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 LOC102723971A0A1B0GUV8 181 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 MFSD2BA6NFX1 497 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 FAM90A26D6RGX4 464 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 LINC01590Q5TEZ4 76 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 ZNF680Q8NEM1 530 aa13.3□□□□□ -0.28
NEDD4-202ENST00000435532 PITX3O75364 302 aa13.29□□□□□ -0.28
NEDD4-202ENST00000435532 ERVS71-1P61550 626 aa13.29□□□□□ -0.28
NEDD4-202ENST00000435532 ZNRF1Q8ND25 227 aa13.29□□□□□ -0.28
NEDD4-202ENST00000435532 KCNK7Q9Y2U2 307 aa13.29□□□□□ -0.28
NEDD4-202ENST00000435532 LINC00312Q9Y6C7 94 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms