RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 C15orf40Q8WUR7 153 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 EAF1Q96JC9 268 aaPredicted RBP12.41□□□□□ -0.42
TREX1-201ENST00000433541 NABP2Q9BQ15 211 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 AGMATQ9BSE5 352 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 SCPEP1Q9HB40 452 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 SIGLEC9Q9Y336 463 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 PMP2P02689 132 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 OR5H8P0DN80 308 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 FCGR2CP31995 323 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 VDAC2P45880 294 aaPredicted RBP12.4□□□□□ -0.42
TREX1-201ENST00000433541 FXYD4P59646 89 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 HERV-K104P61576 105 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 CBX3Q13185 183 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 HABP2Q14520 560 aaPredicted RBP12.4□□□□□ -0.42
TREX1-201ENST00000433541 MMDQ15546 238 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
TREX1-201ENST00000433541 SNAPC3Q92966 411 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 ZNF251Q9BRH9 671 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 SLIRPQ9GZT3 109 aaKnown RBP12.4□□□□□ -0.42
TREX1-201ENST00000433541 RBM38Q9H0Z9 239 aaKnown RBP12.4□□□□□ -0.42
TREX1-201ENST00000433541 MIXL1Q9H2W2 232 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 C16orf95Q9H693 158 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 OR2W1Q9Y3N9 320 aa12.4□□□□□ -0.42
TREX1-201ENST00000433541 OR5H14A6NHG9 310 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 SH2D7A6NKC9 451 aaPredicted RBP12.39□□□□□ -0.43
TREX1-201ENST00000433541 ZNF701M0R085 212 aaPredicted RBP12.39□□□□□ -0.43
TREX1-201ENST00000433541 VSIG10L2P0DP72 767 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 HLA-DMAP28067 261 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 MC5RP33032 325 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 S100A5P33763 92 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 RCVRNP35243 200 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 BLCAPP62952 87 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 FCAMRQ8WWV6 532 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 RBMXL1Q96E39 390 aaKnown RBP12.39□□□□□ -0.43
TREX1-201ENST00000433541 RASL11BQ9BPW5 248 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 TOLLIPQ9H0E2 274 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 SDHAF2Q9NX18 166 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 NDUFA13Q9P0J0 144 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 WASHC3Q9Y3C0 194 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 MMP24Q9Y5R2 645 aa12.39□□□□□ -0.43
TREX1-201ENST00000433541 SULT1C2O00338 296 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 TUSC2O75896 110 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 CT45A6P0DMU7 189 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 CT45A5P0DMU8 189 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 CT45A7P0DMV0 189 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 RFX2P48378 723 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 ACTBP60709 375 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 TSPAN5P62079 268 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 PLGLAQ15195 96 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 TMEM17Q86X19 198 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 ZNF645Q8N7E2 425 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
TREX1-201ENST00000433541 TENM1Q9UKZ4 2725 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 FGF16O43320 207 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 RBBP9O75884 186 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 SLC22A5O76082 557 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 PPYP01298 95 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 AADACP22760 399 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 HRH1P35367 487 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 EBI3Q14213 229 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 TMEM95Q3KNT9 176 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 C11orf88Q6PI97 169 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 KLHDC1Q8N7A1 406 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 C5orf56Q8N8D9 126 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 OR52I2Q8NH67 350 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 SLC5A7Q9GZV3 580 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
TREX1-201ENST00000433541 DPPA5A6NC42 116 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 FABP12A6NFH5 140 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 H0YJW9 148 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 IFNA6P05013 189 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 THBS3P49746 956 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
TREX1-201ENST00000433541 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 PYHIN1Q6K0P9 492 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 OR8H1Q8NGG4 311 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 DGCR14Q96DF8 476 aaKnown RBP12.36□□□□□ -0.43
TREX1-201ENST00000433541 ABHD1Q96SE0 405 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 ZNF2Q9BSG1 426 aaPredicted RBP12.36□□□□□ -0.43
TREX1-201ENST00000433541 MMP27Q9H306 513 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
TREX1-201ENST00000433541 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
TREX1-201ENST00000433541 IGKV1D-13A0A0B4J2D9 117 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 NBR2O15453 112 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 TPPPO94811 219 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 IGKV1-13P0DP09 117 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 TNFSF8P32971 234 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 F2RL1P55085 397 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 LINC00205P59089 165 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
TREX1-201ENST00000433541 DGCR2P98153 550 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 DYRK1AQ13627 763 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 ACTBL2Q562R1 376 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 SHISA2Q6UWI4 295 aa12.35□□□□□ -0.43
TREX1-201ENST00000433541 Q6ZS46 218 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms