RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ASF1BQ9NVP2 202 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 DNAJC27Q9NZQ0 273 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 HMGXB4Q9UGU5 601 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 GMEB1Q9Y692 573 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 U3KQA8 63 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 DOCK6Q96HP0 2047 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 COL4A2P08572 1712 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 MYO5AQ9Y4I1 1855 aaKnown RBP1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 APCP25054 2843 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 MED13Q9UHV7 2174 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 VGLL3A8MV65 326 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 C10orf142B7Z368 130 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC16A4O15374 487 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 DEXIO95424 95 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 TNFP01375 233 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 TNNC2P02585 160 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGLV7-43P04211 117 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 INAFM2P0DMQ5 153 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 CCL4P13236 92 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF35P13682 527 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 CNTFRP26992 372 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 IMPA1P29218 277 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC6A1P30531 599 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 MAGEA6P43360 314 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 PSMD8P48556 350 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 GDI2P50395 445 aaKnown RBP1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 XKP51811 444 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 RBX1P62877 108 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 TFAMQ00059 246 aaKnown RBP1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 TRAM1Q15629 374 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 CASP12Q6UXS9 341 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 DAZ4Q86SG3 579 aaKnown RBP1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 GALNT10Q86SR1 603 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 LYPD1Q8N2G4 141 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZIC4Q8N9L1 334 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR8G5Q8NG78 346 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR2M3Q8NG83 312 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 CLHC1Q8NHS4 586 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 YIPF6Q96EC8 236 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 ANKRD36BP1Q96IX9 119 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 ATP6V1G3Q96LB4 118 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 PKMYT1Q99640 499 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 MED10Q9BTT4 135 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 THTPAQ9BU02 230 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 C1orf50Q9BV19 199 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 ULBP3Q9BZM4 244 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 RHOFQ9HBH0 211 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 SPACA1Q9HBV2 294 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 IFT46Q9NQC8 304 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 DAZ1Q9NQZ3 744 aaKnown RBP1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 SDHAF3Q9NRP4 125 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 CHMP5Q9NZZ3 219 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 DHCR7Q9UBM7 475 aaKnown RBP1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 TAC3Q9UHF0 121 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 CELSR1Q9NYQ6 3014 aa1.64□□□□□ -2.15
HMGB1P27-201ENST00000431429 KNL1Q8NG31 2342 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 BSNQ9UPA5 3926 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 MED13LQ71F56 2210 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 CCDC168Q8NDH2 2452 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 ESPL1Q14674 2120 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGHV3-43A0A0B4J1X8 118 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 A0A1W2PQ67 120 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 PGPA6NDG6 321 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 CD300LBA8K4G0 201 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM250H0YL14 139 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 KPNA3O00505 521 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 TOX3O15405 576 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 CRXO43186 299 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 TCF21O43680 179 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 ENSAO43768 121 aaKnown RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 PDCD6O75340 191 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 KCNK2O95069 426 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 RPA3P35244 121 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 ACOT2P49753 483 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 PLTPP55058 493 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 UBE2KP61086 200 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 FAM162BQ5T6X4 162 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZFAND6Q6FIF0 208 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 LAMTOR1Q6IAA8 161 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF773Q6PK81 442 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM136Q6ZRR5 245 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 Q6ZS92 163 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 FAM183BPQ6ZVS7 135 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 LINC00596Q86U02 117 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 SELENOHQ8IZQ5 122 aaKnown RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 SYCE1Q8N0S2 351 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM161BQ8NDZ6 487 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 SGMS2Q8NHU3 365 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 FAM45AQ8TCE6 357 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 NELFBQ8WX92 580 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 GTF2H4Q92759 462 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 YIPF5Q969M3 257 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 RMND5BQ96G75 393 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 PPP1R36Q96LQ0 422 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 PITX2Q99697 317 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 DIABLOQ9NR28 239 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 MS4A12Q9NXJ0 267 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 STOML2Q9UJZ1 356 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 EML5Q05BV3 1969 aa1.63□□□□□ -2.15
HMGB1P27-201ENST00000431429 CSPG4Q6UVK1 2322 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms