RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CEACAM3P40198 252 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 VDAC2P45880 294 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-204ENST00000430071 DGCR2P98153 550 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 IL18Q14116 193 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 ABCA11PQ4W5N1 156 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 PYHIN1Q6K0P9 492 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 CCDC190Q86UF4 302 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 ODF3L1Q8IXM7 274 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 OR6Q1Q8NGQ2 317 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 CREB3L1Q96BA8 519 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 DNAH3Q8TD57 4116 aa13.47□□□□□ -0.25
UBE3D-204ENST00000430071 FABP12A6NFH5 140 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 ITGB1BP1O14713 200 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 CTXN2P0C2S0 81 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 S100A5P33763 92 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 REG1BP48304 166 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 ZNF137PP52743 207 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 ARPC4P59998 168 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 ARSJQ5FYB0 599 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-204ENST00000430071 TCTEX1D4Q5JR98 221 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 LYSMD2Q8IV50 215 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 H1FOOQ8IZA3 346 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-204ENST00000430071 OR5AP2Q8NGF4 316 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 C15orf40Q8WUR7 153 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 CAPSLQ8WWF8 208 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 TOMM40LQ969M1 308 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 RPEQ96AT9 228 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 RBM14Q96PK6 669 aaKnown RBP13.46□□□□□ -0.25
UBE3D-204ENST00000430071 GINS4Q9BRT9 223 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 KLK11Q9UBX7 282 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 V9GYH0 126 aa13.46□□□□□ -0.25
UBE3D-204ENST00000430071 A0A1W2PPI3 338 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OOSP1A8MZH6 123 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 HSD17B6O14756 317 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 PRB2P02812 416 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OPN1MWP04001 364 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OPN1MW2P0DN77 364 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OPN1MW3P0DN78 364 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 NFYAP23511 347 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 BRS3P32247 399 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 RCVRNP35243 200 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OR3A3P47888 321 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 FAM131AQ6UXB0 335 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 DRAM1Q8N682 238 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OR56B4Q8NH76 319 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 EDARADDQ8WWZ3 215 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 ABHD14BQ96IU4 210 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 MTFP1Q9UDX5 166 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 RNF150Q9ULK6 438 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 A0A1W2PRX2 142 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 GABARAPH6UMI1 98 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 CTDSPLO15194 276 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OR2F2O95006 317 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 SNRNP70P08621 437 aaKnown RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OR8U9P0C7N5 309 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 IL3RAP26951 378 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 HLA-DMAP28067 261 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 RAB7AP51149 207 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 MRPS10P82664 201 aaKnown RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 ZNF816Q0VGE8 651 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 CDK10Q15131 360 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OR5AU1Q8NGC0 362 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 OR8U1Q8NH10 309 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 SMIM4Q8WVI0 70 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 RTN4IP1Q8WWV3 396 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 FCAMRQ8WWV6 532 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 ZNF251Q9BRH9 671 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 NECAP2Q9NVZ3 263 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 RABL2AQ9UBK7 228 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-204ENST00000430071 RABL2BQ9UNT1 228 aa13.45□□□□□ -0.26
UBE3D-204ENST00000430071 TUSC2O75896 110 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 PMP2P02689 132 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 GAPDHP04406 335 aaKnown RBP13.44□□□□□ -0.26
UBE3D-204ENST00000430071 OR5H8P0DN80 308 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 RFX2P48378 723 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 CD83Q01151 205 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 HNF4GQ14541 408 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 ZNF79Q15937 498 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 BEAN1Q3B7T3 259 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 CCDC144NLQ6NUI1 221 aa13.44□□□□□ -0.26
UBE3D-204ENST00000430071 IGHV3-72A0A0B4J1Y9 119 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 IGHV1-3A0A0C4DH29 117 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 J3QRK9 145 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 GSTZ1O43708 216 aaPredicted RBP13.43□□□□□ -0.26
UBE3D-204ENST00000430071 LANCL1O43813 399 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 PROP1O75360 226 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 PEX14O75381 377 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 RBBP9O75884 186 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 HRH1P35367 487 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 ETV6P41212 452 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 C9orf152Q5JTZ5 239 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 SAMD5Q5TGI4 173 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 ZNF833PQ6ZTB9 187 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 OVCH2Q7RTZ1 564 aa13.43□□□□□ -0.26
UBE3D-204ENST00000430071 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms